Rv0006 - c.-575G>T


Drug resistance types
53 Sensitive 22 RR-TB 32 HR-TB 62 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 66 Other
lineage Counts
lineage Count
lineage4.9 102
lineage4.1.2.1 10
La1;lineage4.1.2 1
M.canetti;lineage2.1 1
lineage2.2.1 10
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.1;lineage4.9 2
lineage1.2.1.2.1 1
lineage4 6
lineage4.3.3 2
lineage3;lineage4.9 1
M.canetti;lineage2.1;lineage4.9 10
lineage1.1.1;lineage4 1
lineage4.1.1.3;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
5
lineage2.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage4.1.1.2 1
lineage3.1.3 1
La3;lineage2.1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage3 1
La3;M.canetti;lineage2.1;lineage4.9 11
La3;lineage4.9 5
M.canetti;lineage4.9 1
lineage1;lineage4.9 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.4.1.1 1
lineage1.1.2 1
lineage2.1;lineage4.3.2 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
La1.7.1 1
lineage1.1.2;lineage4 1
lineage4.2.1.1;lineage4.3.3 1
lineage2.2.1;lineage4 1
La3;M.canetti;lineage2.1;lineage3.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 2
lineage4.2.1 1
M.canetti;lineage2.2 1
La1;lineage2;lineage4.9 1
lineage1.2.1 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage4.5 1
lineage4.3.2.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.6.2.2 2
lineage4.1;lineage4.8 2
La3;lineage2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1;lineage3 1
lineage1.1.3.1 1
La3;M.canetti;lineage4.9 2
lineage4.1.1.1 1
lineage4.3.4.2.1 1
M.canetti;lineage2.1;lineage4 1
lineage2.2 1
lineage4.1.2 1
La1;lineage4.9 2
M.canetti;lineage2.1;lineage6.3 1
lineage4.1.2.1.1 1
spoligotype Counts
spoligotype Count
None 236
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675547 Sensitive lineage4.9 None
SRR1162864 MDR-TB lineage4.1.2.1 None
SRR9970978 Other La1;lineage4.1.2 None
ERR363447 Other lineage4.9 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
SRR1180137 RR-TB lineage2.2.1 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR1510066 RR-TB lineage1.2.1.2.1 None
SRR6045892 Sensitive lineage4.9 None
ERR2446382 Other lineage4 None
SRR12708419 Other lineage4.3.3 None
SRR5341396 Other lineage3;lineage4.9 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045503 Other lineage4.9 None
SRR3675209 Sensitive lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR363446 Other lineage4.9 None
ERR1063896 HR-TB None
SRR12708416 Sensitive None
ERR6358979 HR-TB lineage4.9 None
ERR369162 Other lineage4.9 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR363449 Other lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4818252 HR-TB lineage4.1.1.2 None
ERR2513121 Sensitive lineage3.1.3 None
SRR3675507 RR-TB lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR1175496 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR3275450 Other lineage4 None
ERR363499 Other lineage4.9 None
SRR1167055 Other lineage4.1.2.1 None
ERR369151 Other lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR3675292 Sensitive lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4821053 RR-TB lineage3 None
SRR3675482 RR-TB lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR6866410 HR-TB lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR363506 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
SRR1181020 Other lineage2.2.1 None
SRR3675487 MDR-TB M.canetti;lineage4.9 None
SRR3675545 RR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR369161 Sensitive lineage4.9 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR373946 Other lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR1063883 HR-TB lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6511621 HR-TB lineage4.9 None
ERR5917710 RR-TB lineage4.1.2.1 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6045371 Other lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4797193 HR-TB lineage1.1.2 None
SRR3675541 Sensitive lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
SRR3675387 Other lineage4.9 None
SRR1181289 RR-TB lineage2.2.1 None
SRR10809074 HR-TB lineage4.9 None
ERR363490 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR369156 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
ERR373947 Other lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
SRR7240492 MDR-TB La1.7.1 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR349266 Other lineage4.9 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR369159 Other lineage4.9 None
ERR502511 HR-TB lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
ERR4817692 MDR-TB lineage1.1.2;lineage4 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR369158 Other lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR3675265 Other lineage4 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6046564 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR14519827 Sensitive lineage1.2.1 None
SRR5341345 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR349265 Other lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323066 HR-TB lineage4.9 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811031 Other lineage4.5 None
ERR400336 Sensitive lineage4.9 None
ERR4811030 Other lineage4.9 None
ERR349299 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR400326 Other lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR3675522 Other lineage4.9 None
ERR751326 Other lineage4.9 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
ERR2229143 RR-TB lineage4.9 None
SRR6045706 Other lineage4.9 None
ERR323107 HR-TB lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5341453 Other lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR363509 Sensitive lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR4178226 Sensitive lineage4 None
SRR6044819 Sensitive lineage4.9 None
SRR11349186 MDR-TB lineage4.3.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2517475 Other lineage4 None
ERR363500 Other lineage4.9 None
SRR3675243 MDR-TB lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
ERR363479 Other lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR363456 Sensitive lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR9786843 Other None
SRR1640750 RR-TB None
ERR11252736 Other lineage4.9 None
ERR212001 HR-TB None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR349300 Other lineage4.9 None
ERR137286 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
SRR9971114 Other lineage2.2.1 None
ERR373945 Other lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
SRR1165506 Other lineage4.1.2.1 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR363421 Other lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
ERR349296 Sensitive lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
SRR1162740 Other lineage4.1.2.1 None
SRR9970980 HR-TB lineage4.1.2 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR369163 Other lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR124636 HR-TB lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR1175508 Sensitive lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR349264 Other lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1035122 HR-TB lineage4.9 None
ERR363498 Other lineage4.9 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4816904 Sensitive lineage4.1.2.1 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR8665994 RR-TB lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR363502 Other lineage4.9 None
SRR6044815 RR-TB lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR3675514 Sensitive lineage4.9 None
ERR363453 Other lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None