Rv3245c - c.-236C>T
Drug resistance types
3 Sensitive
13 RR-TB
14 HR-TB
26 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2.1 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage4.9 | 14 |
| M.canetti;lineage4.9 | 3 |
| lineage2.2 | 2 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| La3;lineage4.9 | 4 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.1;lineage4.8 | 2 |
| lineage1.2.2.1;lineage4.4.1.1 | 2 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| lineage4 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| 2 | |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| lineage3 | 2 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage4.6.2.2 | 2 |
| lineage3.1.2.2 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9 | 2 |
| La2;lineage4.9;lineage9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;lineage4 | 1 |
| lineage1.1.3.1 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.1.1.3 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage2.2.1 | 3 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 69 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11465511 | Other | lineage4.3.4.2.1 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR3675441 | RR-TB | lineage4.9 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR1172310 | MDR-TB | lineage4.9 | None | SRR26399491 | Sensitive | lineage1.1.1.1 | None | ERR987729 | MDR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR1035162 | MDR-TB | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR5311079 | MDR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR133986 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR9786843 | Other | None | ERR11465711 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR26159047 | RR-TB | lineage4.6.3;lineage4.9 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR502889 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR987722 | MDR-TB | None | SRR3675390 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR3283031 | Other | La3;lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR990545 | RR-TB | lineage3 | None | SRR3675586 | RR-TB | M.canetti;lineage4.6.4;lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR3797063 | Other | La3;lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | SRR26399255 | Sensitive | lineage2.2.1 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR1181289 | RR-TB | lineage2.2.1 | None | SRR5341418 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR4816656 | Other | lineage4.9 | None | SRR1180137 | RR-TB | lineage2.2.1 | None |
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