Rv3596c - p.Ala377Gly
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
115 Sensitive
6 RR-TB
43 HR-TB
14 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
81 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 147 |
| La1.7;lineage4.9;lineage6 | 1 |
| La1.7 | 2 |
| lineage4.3.3 | 2 |
| La3;lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La3;lineage4 | 1 |
| La2;lineage2.2 | 1 |
| lineage2.2 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.1.2.1 | 3 |
| lineage1.2.1.1 | 1 |
| La1.7;lineage4.9 | 6 |
| La3;lineage4.9 | 12 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.4.1.1 | 1 |
| lineage2.2.1 | 15 |
| lineage4 | 5 |
| lineage4.1.1.2 | 1 |
| lineage4.6.2.2 | 4 |
| lineage4.3.2.1 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage1.1.2 | 2 |
| M.canetti;lineage1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage3 | 4 |
| lineage4.4.1.1.1 | 1 |
| 6 | |
| lineage4.8 | 2 |
| lineage6 | 1 |
| La1.7.1 | 1 |
| La1;lineage4.9 | 2 |
| lineage4.1.2 | 2 |
| M.canetti;lineage4.9 | 3 |
| lineage4.9;lineage7 | 3 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.7 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage2.2.1;lineage4 | 1 |
| La1.8.1 | 2 |
| La2;lineage4.9 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.1 | 1 |
| lineage4.3 | 1 |
| lineage4.2.1 | 1 |
| lineage6.1.3 | 1 |
| lineage1.1.3.1 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage5.1.4 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 265 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR137286 | Other | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | ERR369162 | Other | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR369151 | Other | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR1183049 | RR-TB | lineage2.2 | None | SRR1159378 | Other | lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR13285068 | Sensitive | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR4830353 | Other | La1.7 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675582 | Other | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR9786525 | Other | lineage4 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR9896144 | Other | lineage3 | None | SRR6045371 | Other | lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR12006550 | Sensitive | None | ERR9786619 | Sensitive | lineage4.8 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR5341303 | Sensitive | lineage4.9 | None | ERR9787336 | RR-TB | lineage6 | None | ERR9786597 | Sensitive | lineage4.6.2.2 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675387 | Other | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR3675246 | Other | lineage4.9 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR323085 | Sensitive | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR212001 | HR-TB | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR3675477 | Sensitive | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR4796577 | HR-TB | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR11252736 | Other | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR3797080 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR387051 | Other | lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR502511 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR12708384 | Sensitive | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | SRR3675279 | Sensitive | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR1169249 | Other | lineage4.9 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR5341366 | Sensitive | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR4819933 | Sensitive | lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR9786526 | Other | lineage4.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR2514552 | Sensitive | lineage3 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR990545 | Other | lineage3 | None | ERR751326 | Other | lineage4.9 | None | ERR867542 | HR-TB | lineage4.3 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR4799378 | Sensitive | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR29096179 | Sensitive | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR5341308 | Sensitive | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR9786843 | Other | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | ERR4817915 | Other | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | SRR6045832 | Other | lineage4.9 | None | SRR1158918 | Sensitive | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None |
|---|
