lineage | Count |
---|---|
57 | |
lineage4.7 | 1 |
lineage4.1.2 | 2 |
lineage2.2.1 | 19 |
lineage4 | 86 |
lineage4.8 | 2 |
lineage4.3.3 | 1 |
lineage2.2 | 3 |
lineage4.1.1.3 | 2 |
lineage4.9 | 68 |
lineage5.1.2 | 1 |
lineage4.1.2.1 | 6 |
lineage4.9;La1.3 | 2 |
La1.3 | 5 |
lineage1.1.2 | 2 |
lineage2.2.1.2 | 1 |
lineage4.5 | 1 |
lineage1.1.3.1 | 1 |
lineage4.6.2.2 | 4 |
lineage6.1.3 | 1 |
lineage4.8;lineage4.1 | 2 |
lineage4.3.4.2 | 1 |
lineage3 | 5 |
lineage6 | 1 |
lineage4.8;lineage4.3.3 | 3 |
lineage4.4.1.1.1 | 1 |
La3 | 1 |
lineage1.2.1.2 | 1 |
La1.7.1 | 1 |
La1.8.1 | 1 |
lineage4.1 | 1 |
lineage4.3.4.2.1 | 3 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage4.3 | 1 |
lineage1.2.1.1 | 1 |
lineage2.1 | 2 |
lineage4.2.1 | 2 |
lineage5.1.4 | 1 |
lineage4.3.2.1 | 1 |
lineage4.9;lineage2.1 | 1 |
lineage2.2.1.1 | 1 |
spoligotype | Count |
---|---|
None | 297 |
ID | Drug resistance | Lineage | Country iso2 | SRR6982196 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | ERR502943 | HR-TB | None | SRR7496471 | Sensitive | None | SRR9970980 | Other | lineage4.1.2 | None | DRR184982 | RR-TB | lineage2.2.1 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR323066 | Sensitive | lineage4 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR1063855 | Other | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR067699 | HR-TB | lineage4 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR1063857 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283028 | Other | None | ERR3283014 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283031 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283040 | HR-TB | None | ERR3283047 | HR-TB | None | ERR363453 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363426 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR373947 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797064 | Sensitive | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None | ERR4024991 | Other | None | ERR400320 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR400326 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769521 | HR-TB | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4796577 | MDR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797264 | Sensitive | None | ERR4797313 | HR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797474 | Other | None | ERR4798431 | HR-TB | None | ERR4798099 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR6358979 | Other | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4812155 | Sensitive | None | ERR6358951 | HR-TB | lineage4 | None | ERR4811030 | Sensitive | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6866410 | Sensitive | None | ERR6866022 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6866639 | Other | None | ERR736837 | Other | lineage4.9 | None | ERR751326 | Sensitive | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR9119669 | HR-TB | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786597 | Sensitive | lineage4.6.2.2 | None | ERR9786619 | Sensitive | lineage4.8 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR990545 | Other | lineage3 | None | ERR9787336 | Other | lineage6 | None | ERR9896144 | Other | lineage3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10808805 | Sensitive | None | SRR1062933 | Sensitive | lineage4.9 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1169306 | Other | None | SRR1173335 | Sensitive | lineage4.9 | None | SRR1173568 | Other | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1175508 | Other | lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR1183049 | Other | lineage2.2 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR14801749 | Sensitive | None | SRR1791747 | Other | La1.8.1 | None | SRR13837507 | HR-TB | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR8692905 | HR-TB | None | SRR3675455 | Sensitive | lineage4 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR8692822 | Other | lineage4.9 | None | SRR8692887 | Other | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675488 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675229 | Other | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR176568 | Other | lineage4.3 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675222 | Other | None | ERR4815471 | Other | lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR1750907 | RR-TB | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675249 | Sensitive | lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR3675279 | Other | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675456 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675318 | Other | lineage4.9 | None | SRR3675501 | HR-TB | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | ERR4816964 | Other | lineage4.9 | None | SRR3675522 | Other | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR212001 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675555 | HR-TB | None | ERR4818929 | HR-TB | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4816470 | Other | lineage3 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816656 | HR-TB | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341387 | Other | lineage4 | None | ERR2514552 | Sensitive | lineage3 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341425 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341469 | Other | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045519 | HR-TB | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045892 | Sensitive | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046210 | Other | lineage4 | None | SRR6045233 | HR-TB | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | ERR4830353 | Other | None | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6046802 | Other | lineage4 | None | ERR4831638 | Sensitive | None | SRR6511621 | HR-TB | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4831719 | MDR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None |
---|