Rv3601c - c.144T>C
Drug resistance types
54 Sensitive
3 RR-TB
187 HR-TB
16 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
95 Other
lineage Counts
| lineage | Count |
|---|---|
| 198 | |
| lineage4.1.2.1 | 7 |
| lineage4 | 55 |
| lineage4.9 | 30 |
| La3 | 1 |
| lineage4.4.1.1 | 3 |
| lineage2.2.1.2 | 1 |
| lineage2.2.1 | 13 |
| lineage2.2 | 9 |
| lineage2.2.1.1 | 1 |
| lineage3.1.2.1 | 6 |
| lineage2 | 3 |
| lineage3.1 | 3 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.5 | 2 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.8 | 1 |
| lineage4.1 | 2 |
| lineage4.9;La3 | 1 |
| lineage4.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.4 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.3 | 1 |
| lineage2.1 | 1 |
| lineage4.8;La3 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.2.1 | 1 |
| lineage3 | 2 |
| lineage4.6.2.2 | 2 |
| La2 | 1 |
| lineage4.1.2 | 1 |
| La1.2 | 1 |
| lineage3.1.2 | 1 |
| La1 | 1 |
| lineage4.3.2 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 360 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10808805 | Sensitive | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1169194 | Other | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1172310 | HR-TB | None | SRR1172817 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173484 | Other | lineage4 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1172728 | MDR-TB | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173629 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173788 | Other | None | SRR1173778 | Other | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1174897 | HR-TB | None | SRR1175074 | MDR-TB | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1183049 | Other | lineage2.2 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1184294 | HR-TB | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1184372 | MDR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR14520125 | HR-TB | lineage3.1.2.1 | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196546 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR13861372 | Other | lineage4.9 | None | SRR13861413 | Sensitive | lineage4.9 | None | SRR13861434 | RR-TB | lineage4.9 | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196566 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR14782405 | HR-TB | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR14801749 | Sensitive | None | SRR15368973 | Other | None | SRR1640750 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR20969677 | HR-TB | lineage2 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR11081257 | Other | lineage4.8 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR26399973 | Other | lineage4.9;La3 | None | ERR176751 | HR-TB | None | SRR3675455 | Sensitive | lineage4 | None | ERR176778 | HR-TB | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR4815604 | HR-TB | None | ERR176779 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675477 | Other | lineage4.9 | None | ERR176793 | Other | lineage4.1.1 | None | SRR6325445 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675465 | HR-TB | None | SRR3675488 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR161033 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675486 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675222 | Other | None | SRR3675221 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675229 | Other | lineage4 | None | SRR3675236 | HR-TB | None | SRR3675234 | Other | None | SRR3675247 | Other | lineage4.9 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675311 | Other | None | SRR3675266 | Sensitive | lineage4.9 | None | ERR176568 | Other | lineage4.3 | None | SRR3675279 | Other | None | ERR176643 | HR-TB | None | SRR3675387 | Sensitive | None | ERR176651 | HR-TB | None | SRR3675318 | Other | lineage4.9 | None | SRR3675383 | HR-TB | None | SRR3675501 | HR-TB | None | ERR181887 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675547 | Other | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675510 | Other | None | SRR3675522 | Other | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR212001 | HR-TB | None | SRR3675545 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR3675550 | Other | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4817060 | RR-TB | None | ERR212121 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | None | ERR212033 | HR-TB | None | ERR212034 | HR-TB | None | SRR3675555 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212123 | Other | None | SRR3675572 | Other | None | ERR212125 | HR-TB | lineage4 | None | SRR3675571 | HR-TB | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR4816656 | HR-TB | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | SRR3742665 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR234659 | HR-TB | None | ERR2512770 | Other | lineage4.2.1 | None | ERR4818929 | HR-TB | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341453 | Sensitive | None | SRR5341396 | Other | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR1035138 | MDR-TB | None | SRR5341293 | HR-TB | lineage4 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341300 | Other | lineage4 | None | SRR5341302 | HR-TB | None | ERR2514821 | Other | lineage2.2.1 | None | SRR2100785 | Sensitive | lineage3.1.2.1 | None | SRR5341418 | Other | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341323 | Sensitive | lineage4 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341333 | HR-TB | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341330 | HR-TB | None | ERR2693231 | Other | None | SRR5341456 | Other | None | ERR2693232 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4 | None | SRR6045519 | HR-TB | None | SRR5341470 | HR-TB | None | ERR2693254 | Other | None | SRR6045503 | HR-TB | None | ERR2693257 | Other | None | SRR5535933 | HR-TB | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | ERR2693230 | Other | None | SRR6045526 | HR-TB | None | SRR6044790 | HR-TB | None | ERR266574 | Sensitive | lineage3.1.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6045555 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6045327 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6046046 | Other | None | SRR6046066 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | SRR6046225 | HR-TB | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6325442 | HR-TB | None | ERR4830353 | Other | None | SRR6046299 | HR-TB | None | SRR6046397 | Other | None | SRR6046362 | HR-TB | None | ERR278594 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046492 | Other | None | SRR6046460 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046514 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6325448 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | SRR6046824 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR323036 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR5311081 | HR-TB | None | ERR294248 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR502532 | HR-TB | None | ERR5311090 | HR-TB | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR294266 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502889 | Other | None | ERR5311099 | HR-TB | None | ERR4820223 | Other | lineage3.1.2.1 | gb | SRR8217918 | HR-TB | None | ERR323043 | HR-TB | None | ERR323038 | HR-TB | None | ERR323039 | HR-TB | None | ERR323041 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | ERR323107 | Other | lineage4 | None | ERR323055 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR323053 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1034652 | Other | None | ERR1035122 | Sensitive | None | ERR1035157 | Other | lineage4.9 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR133986 | HR-TB | None | ERR1063896 | Sensitive | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR3283025 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283017 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283024 | Other | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3468544 | HR-TB | None | ERR349296 | Sensitive | lineage4 | None | ERR3797014 | Other | None | ERR3797016 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797017 | Other | None | ERR3797043 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR3797036 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797044 | Other | None | ERR3797061 | Other | None | ERR3797069 | Other | None | ERR400320 | Sensitive | lineage4 | None | ERR3797083 | HR-TB | None | ERR387051 | HR-TB | None | ERR400326 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR405209 | Sensitive | lineage4 | None | ERR403380 | Sensitive | lineage3.1.2.1 | None | ERR4188350 | HR-TB | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769452 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4769450 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769521 | HR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4800341 | Other | lineage3 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797474 | Other | None | ERR4798406 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4797313 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811493 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4810741 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4811105 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6358991 | HR-TB | None | ERR4812155 | Sensitive | None | ERR5336148 | Other | None | ERR5897105 | HR-TB | lineage3.1.2.1 | None | ERR6358837 | HR-TB | None | ERR6359045 | HR-TB | None | ERR702404 | HR-TB | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR6866410 | Sensitive | None | ERR6866807 | HR-TB | lineage4 | None | ERR736839 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR736835 | HR-TB | None | ERR702406 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None | ERR736874 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR736867 | HR-TB | None | ERR8976043 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9117709 | HR-TB | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987722 | HR-TB | None |
|---|
