Rv3601c - c.144T>C


Drug resistance types
54 Sensitive 3 RR-TB 187 HR-TB 16 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 95 Other
lineage Counts
lineage Count
lineage2 3
198
lineage7;lineage2.2.1.2 1
lineage2.2.1 13
lineage4.8 1
lineage2.2 9
lineage4.1 2
lineage4.9;La3 1
lineage6.3;lineage2.2.1 1
lineage4 55
lineage4.9 30
lineage4.1.1 1
lineage4.3.4.2.1 1
lineage4.3.4 1
lineage3;lineage2.1 1
lineage4.3 1
lineage2.1 1
lineage4.1.1.3 1
lineage4.4.1.1 3
lineage4.8;La3 1
lineage4;lineage1.1.2 1
lineage4.1.1.2 1
lineage4.2.1 1
lineage3.1.2.1 6
lineage4.1.2.1 7
lineage3 2
lineage4.6.2.2 2
lineage3.1 3
La2 1
lineage4.1.2 1
La1.2 1
La1 1
lineage3.1.2 1
lineage4.5 2
lineage4.3.2 1
lineage3.1.2.2;lineage3.1.2.1 1
La3 1
lineage2.2.1.2 1
lineage2.2.1.1 1
spoligotype Counts
spoligotype Count
None 360
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR20969677 HR-TB lineage2 None
SRR19304036 HR-TB None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR19303884 HR-TB None
SRR20969731 Other lineage2.2.1 None
ERR11081257 Other lineage4.8 None
SRR20969708 HR-TB lineage2.2 None
SRR20970016 Other lineage2.2 None
SRR12708416 Sensitive lineage4.1 None
SRR26399973 Other lineage4.9;La3 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
ERR4815604 HR-TB None
ERR176778 HR-TB None
SRR3675464 HR-TB lineage4.1 None
ERR176751 HR-TB None
SRR3675455 Sensitive lineage4 None
SRR3675473 Sensitive lineage4.9 None
ERR176779 HR-TB None
SRR3675477 Other lineage4.9 None
SRR6325445 HR-TB None
ERR176793 Other lineage4.1.1 None
ERR1035239 HR-TB None
SRR3675465 HR-TB None
SRR3675488 HR-TB None
ERR158583 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
ERR161033 HR-TB None
ERR161034 Other lineage4.3.4.2.1 None
ERR161039 Sensitive lineage4.3.4 None
SRR3675210 Sensitive lineage4.9 None
ERR4814536 MDR-TB lineage3;lineage2.1 None
SRR3675486 HR-TB None
ERR181744 HR-TB None
SRR3675221 HR-TB None
SRR3675222 Other None
SRR3675229 Other lineage4 None
SRR3675236 HR-TB None
SRR3675234 Other None
ERR181824 HR-TB lineage4 None
SRR3675246 Sensitive lineage4 None
SRR3675247 Other lineage4.9 None
SRR3675266 Sensitive lineage4.9 None
SRR3675279 Other None
ERR176568 Other lineage4.3 None
SRR3675311 Other None
ERR176643 HR-TB None
ERR181887 HR-TB None
ERR176651 HR-TB None
SRR3675318 Other lineage4.9 None
SRR3675501 HR-TB None
SRR3675383 HR-TB None
SRR3675558 HR-TB None
SRR3675510 Other None
SRR3675522 Other None
SRR3675547 Other lineage4.9 None
SRR3675548 Sensitive lineage4.9 None
SRR3675545 HR-TB None
ERR212001 HR-TB None
SRR3675550 Other None
SRR5341422 HR-TB lineage2.1 None
ERR212034 HR-TB None
ERR4817060 RR-TB None
SRR3675387 Sensitive None
ERR176740 HR-TB None
SRR3675514 Sensitive lineage4.9 None
ERR212033 HR-TB None
SRR3675555 HR-TB None
ERR212123 Other None
SRR3675572 Other None
ERR212125 HR-TB lineage4 None
ERR212121 HR-TB None
ERR4816466 HR-TB None
ERR212138 HR-TB lineage4 None
SRR3675571 HR-TB None
ERR4816551 HR-TB lineage4.1.1.3 None
SRR5341384 Sensitive lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR3742665 HR-TB None
ERR4817893 Other lineage4.8;La3 None
ERR4816585 Other lineage2.2 None
ERR4816656 HR-TB None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
ERR4818252 Other lineage4.1.1.2 None
ERR234659 HR-TB None
SRR5341396 Other lineage4 None
ERR4818929 HR-TB None
ERR2512770 Other lineage4.2.1 None
SRR5341373 HR-TB lineage4 None
SRR5341461 Sensitive lineage4 None
SRR5341453 Sensitive None
SRR5341387 Other lineage4 None
SRR5341432 HR-TB lineage4 None
SRR2100785 Sensitive lineage3.1.2.1 None
SRR5341418 Other None
ERR4820854 Other lineage4.1.2.1 None
SRR5341400 HR-TB lineage4 None
ERR1035138 MDR-TB None
SRR5341437 Sensitive lineage4.9 None
SRR5341293 HR-TB lineage4 None
SRR5341300 Other lineage4 None
SRR5341296 Sensitive lineage4.9 None
ERR4819781 Other lineage2.2.1 None
SRR5341308 Sensitive lineage4 None
SRR5341299 Sensitive lineage4 None
SRR5341303 RR-TB lineage4 None
ERR2514821 Other lineage2.2.1 None
SRR5341302 HR-TB None
SRR5341323 Sensitive lineage4 None
SRR5341313 HR-TB None
ERR6359082 Other lineage4.9 None
SRR5341333 HR-TB None
ERR2693231 Other None
SRR5341345 Sensitive lineage4.9 None
ERR2693232 Other lineage4.9 None
SRR5341456 Other None
SRR5341330 HR-TB None
SRR5341467 Other lineage4 None
ERR2693254 Other None
ERR2693230 Other None
SRR5341470 HR-TB None
ERR4821053 Other lineage3 None
ERR2693239 HR-TB None
SRR6045526 HR-TB None
ERR2693257 Other None
SRR6045503 HR-TB None
SRR6044819 Sensitive lineage4.9 None
SRR5535933 HR-TB None
ERR266574 Sensitive lineage3.1.2.1 None
SRR6045519 HR-TB None
SRR6045555 HR-TB None
SRR6045892 Sensitive None
SRR6044790 HR-TB None
SRR6045053 Other None
SRR6046133 HR-TB None
SRR6045952 HR-TB None
SRR6045217 Other lineage4 None
SRR6046046 Other None
SRR6045233 HR-TB None
SRR6045327 HR-TB None
SRR6046253 HR-TB lineage4.9 None
SRR6046066 HR-TB None
SRR6046225 HR-TB None
SRR6046245 Other lineage4.9 None
SRR6325442 HR-TB None
SRR6046299 HR-TB None
ERR4830353 Other None
ERR278594 HR-TB None
SRR6046362 HR-TB None
SRR6046397 Other None
SRR6046514 HR-TB None
SRR6325444 HR-TB None
SRR6046460 HR-TB None
SRR6046492 Other None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR6046540 HR-TB None
SRR6046594 HR-TB lineage4 None
SRR6046824 HR-TB None
SRR6046878 HR-TB lineage4 None
ERR323036 HR-TB None
ERR323034 HR-TB lineage3.1 None
ERR4831117 HR-TB None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR4831546 HR-TB lineage2.2 None
SRR6325448 HR-TB None
SRR6046644 HR-TB None
SRR6325447 HR-TB None
SRR6397654 HR-TB lineage4.1.2.1 None
ERR502524 HR-TB La2 None
ERR502510 Sensitive lineage4 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR294248 HR-TB None
ERR294266 HR-TB None
ERR502889 Other None
ERR502532 HR-TB None
ERR323038 HR-TB None
ERR5311099 HR-TB None
SRR8217918 HR-TB None
SRR9970980 Other lineage4.1.2 None
ERR5311090 HR-TB None
ERR5311081 HR-TB None
ERR4820223 Other lineage3.1.2.1 gb
ERR323043 HR-TB None
ERR323039 HR-TB None
ERR323041 HR-TB None
ERR323055 HR-TB None
ERR323107 Other lineage4 None
ERR323054 HR-TB lineage3.1 None
ERR323053 HR-TB None
ERR323085 Sensitive lineage4 None
ERR323063 HR-TB None
ERR323066 Sensitive lineage4 None
ERR1034652 Other None
ERR1023525 HR-TB lineage4 None
ERR323108 HR-TB lineage4 None
ERR1063839 HR-TB lineage2.2 None
ERR1035122 Sensitive None
ERR1035157 Other lineage4.9 None
ERR1063883 Sensitive lineage4 None
ERR1063857 HR-TB None
ERR1063862 HR-TB None
ERR1063858 HR-TB None
ERR1063859 HR-TB None
ERR3273109 MDR-TB lineage4 None
ERR1063896 Sensitive None
ERR133986 HR-TB None
ERR3283017 HR-TB None
ERR3283024 Other None
ERR3283021 HR-TB None
ERR3283025 HR-TB None
ERR3283027 HR-TB None
ERR3283048 HR-TB lineage4.9 None
ERR3283032 HR-TB None
ERR3283036 HR-TB None
ERR3283055 HR-TB None
ERR3283058 Other lineage4.9 None
ERR3445502 HR-TB lineage4 None
ERR3445504 HR-TB None
ERR3445501 HR-TB None
ERR3445503 HR-TB None
ERR3468544 HR-TB None
ERR3797014 Other None
ERR349296 Sensitive lineage4 None
ERR3797016 HR-TB None
ERR3797017 Other None
ERR3797043 HR-TB None
ERR3797036 HR-TB None
ERR3797046 HR-TB None
ERR3797069 Other None
ERR3797044 Other None
ERR3797061 Other None
ERR3797047 HR-TB lineage4 None
ERR3797082 Other lineage4.9 None
ERR3797083 HR-TB None
ERR387051 HR-TB None
ERR400320 Sensitive lineage4 None
ERR400326 Sensitive lineage4 None
ERR4769452 HR-TB None
ERR4188350 HR-TB None
ERR4024991 Other None
ERR403380 Sensitive lineage3.1.2.1 None
ERR405209 Sensitive lineage4 None
ERR4596910 Sensitive lineage4 None
ERR473332 Other lineage4 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4769450 HR-TB None
ERR4769497 HR-TB La1.2 None
ERR4769521 HR-TB None
ERR4796929 Sensitive lineage4 None
ERR4797313 HR-TB None
ERR4797184 Sensitive lineage4 None
ERR4797350 Sensitive lineage4.9 None
ERR4798406 HR-TB None
ERR4798262 HR-TB La1 None
ERR4797474 Other None
ERR4798648 HR-TB lineage3.1.2 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4799025 Pre-XDR-TB None
ERR4799378 Sensitive lineage4 None
ERR4800341 Other lineage3 None
ERR4810624 HR-TB lineage2.2 None
ERR4811031 Sensitive lineage4.5 None
ERR4810741 HR-TB None
ERR4811022 HR-TB None
ERR4811493 HR-TB None
ERR4811030 Sensitive None
ERR4811105 HR-TB None
ERR4811142 MDR-TB None
ERR5336148 Other None
ERR4812155 Sensitive None
ERR6359045 HR-TB None
ERR5897105 HR-TB lineage3.1.2.1 None
ERR6358837 HR-TB None
ERR6358991 HR-TB None
ERR6866022 Other None
ERR6866410 Sensitive None
ERR6866639 Other None
ERR6866807 HR-TB lineage4 None
ERR702406 HR-TB None
ERR702404 HR-TB None
ERR736834 Sensitive lineage4 None
ERR736839 Other None
ERR736835 HR-TB None
ERR736856 HR-TB lineage4 None
ERR736867 HR-TB None
ERR736865 HR-TB None
ERR751326 Sensitive lineage4 None
ERR736872 Sensitive lineage4 None
ERR736874 HR-TB None
ERR772255 MDR-TB lineage4.3.2 None
ERR8976043 HR-TB None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9117709 HR-TB None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
ERR987722 HR-TB None
SRR10808805 Sensitive None
SRR1167384 Other lineage4 None
SRR1158918 Sensitive lineage4 None
SRR1162864 HR-TB lineage4.1.2.1 None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR10809074 Sensitive lineage4 None
SRR1165584 Other lineage4.1.2.1 None
SRR1169249 Other La3 None
SRR1169194 Other None
SRR1169306 Other None
SRR1172728 MDR-TB None
SRR1172310 HR-TB None
SRR1172844 MDR-TB lineage4.4.1.1 None
SRR1172817 HR-TB None
SRR1172951 Other None
SRR1173400 Other None
SRR1173118 Other None
SRR1173384 Other lineage4 None
SRR1173562 HR-TB lineage4 None
SRR1173484 Other lineage4 None
SRR1173453 Other lineage4.4.1.1 None
SRR1175496 HR-TB lineage4.9 None
SRR1173629 Other None
SRR1173706 Other lineage4.9 None
SRR1173778 Other None
SRR1173788 Other None
SRR1173633 HR-TB lineage4.9 None
SRR1174897 HR-TB None
SRR1175074 MDR-TB None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1180137 Other lineage2.2.1 None
SRR1175507 MDR-TB lineage4 None
SRR1175500 MDR-TB lineage4 None
SRR1181289 Other lineage2.2.1 None
SRR1180172 Other lineage2.2.1 None
SRR1180996 HR-TB lineage4 None
SRR1181020 Other lineage2.2.1 None
SRR1184372 MDR-TB None
SRR1183049 Other lineage2.2 None
SRR1183106 Other lineage2.2.1.1 None
SRR1183965 Sensitive lineage4.9 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184294 HR-TB None
SRR1196546 HR-TB None
SRR1184380 HR-TB None
SRR1184388 Other None
SRR1196474 HR-TB lineage3.1 None
SRR12142341 HR-TB None
SRR1196677 HR-TB lineage2 None
SRR12142339 HR-TB lineage2.2.1 None
SRR1196566 HR-TB None
SRR1196768 MDR-TB None
SRR13423649 Sensitive lineage2.2.1 None
SRR12416824 HR-TB None
SRR13861372 Other lineage4.9 None
SRR13861413 Sensitive lineage4.9 None
SRR14520125 HR-TB lineage3.1.2.1 None
SRR13861434 RR-TB lineage4.9 None
SRR1640750 HR-TB None
SRR14801749 Sensitive None
SRR15368973 Other None
SRR14782405 HR-TB None
SRR18213713 HR-TB lineage4.5 None