Rv3596c - c.1197G>C
Drug resistance types
54 Sensitive
9 RR-TB
31 HR-TB
8 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
24 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.6.1.1 | 2 |
| lineage4.9 | 39 |
| 14 | |
| lineage4.2.1 | 2 |
| lineage3.1.2.2 | 1 |
| lineage2.2.1 | 12 |
| La2 | 1 |
| lineage4.8.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage2.2 | 4 |
| lineage4 | 7 |
| lineage6.1.1 | 2 |
| lineage3.1.2 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage3 | 5 |
| lineage2.2.1.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.8;lineage4.3.3 | 2 |
| lineage4.8 | 16 |
| La3 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| lineage4.5 | 1 |
| lineage1.2.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage1.1.1 | 1 |
| La1.2 | 1 |
| lineage4.3 | 1 |
| lineage3.1.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 131 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4819947 | Sensitive | lineage4.1.1 | None | ERR2514277 | Sensitive | lineage4.1.2.1 | None | ERR4821147 | RR-TB | lineage4.6.1.1 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR5341470 | HR-TB | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6257067 | HR-TB | lineage4.2.1 | None | SRR6045308 | Other | lineage3.1.2.2 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6257068 | Sensitive | lineage2.2.1 | None | ERR502524 | HR-TB | La2 | None | SRR8217918 | HR-TB | None | ERR323039 | HR-TB | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR036207 | Other | lineage4.9 | None | ERR323053 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR1413486 | Sensitive | lineage4.9 | None | ERR1194817 | HR-TB | lineage2.2 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4028192 | Sensitive | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4798504 | Other | lineage3 | None | ERR736837 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736865 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR990545 | Other | lineage3 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR1002695 | Sensitive | lineage2.2.1 | None | SRR1002691 | HR-TB | lineage4.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR11972157 | MDR-TB | lineage2.2.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183049 | Other | lineage2.2 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR12199466 | HR-TB | lineage4.5 | None | SRR12199442 | HR-TB | lineage1.2.2 | None | SRR11972259 | Sensitive | lineage1.2.1.2.1 | None | SRR11972438 | HR-TB | lineage1.1.1 | None | SRR14088363 | HR-TB | lineage3 | None | SRR13986568 | Other | La1.2 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR14088384 | MDR-TB | lineage3 | None | ERR212033 | HR-TB | None | ERR176643 | HR-TB | None | ERR176740 | HR-TB | None | ERR2229544 | Sensitive | lineage4.8 | None | ERR176751 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR2229728 | Sensitive | lineage4.8 | dk | ERR2229107 | Sensitive | lineage4 | None | ERR2229163 | Sensitive | lineage4 | None | ERR4816326 | Sensitive | lineage3 | None | ERR212034 | HR-TB | None | ERR2245281 | Sensitive | lineage3.1.1 | no | ERR2229156 | Sensitive | lineage4.8 | None | ERR2229343 | Sensitive | lineage4.8 | dk | ERR2229635 | Sensitive | lineage4.8 | None | ERR2229643 | Other | lineage4.8 | None | ERR2229313 | Sensitive | lineage4.8 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR2229335 | Sensitive | lineage4.8 | dk | ERR2229394 | Other | lineage4.8 | None | ERR2229357 | Sensitive | lineage4.8 | dk | ERR2229381 | Sensitive | lineage4.8 | None | ERR2229414 | Sensitive | lineage4.8 | None | ERR2229428 | Sensitive | lineage4.8 | None | ERR2513628 | Other | lineage4.1.2.1 | None | ERR2229702 | Other | lineage4.8 | None | ERR2229480 | Sensitive | lineage4 | None | ERR4816874 | HR-TB | lineage2.2.1 | gb | ERR245675 | Sensitive | lineage1.1.2 | None | ERR4816852 | Other | lineage4.9 | None | ERR2503565 | Sensitive | lineage4.2.1.1 | fi |
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