Rv3596c - c.1197G>C


Drug resistance types
17 Sensitive 6 RR-TB 18 HR-TB 7 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 17 Other
lineage Counts
lineage Count
lineage4.9 23
lineage6.1.1 2
La3;M.canetti;lineage4.9 1
La3;lineage4.9 3
lineage2.1;lineage4.9 1
lineage4.9;lineage9 2
lineage4.1.1.3 2
lineage3.1.2.2 1
La2;lineage4.9;lineage9 1
lineage2.2.1 5
lineage2.2.1;lineage4.9 1
lineage1.1.2 1
lineage3.1.2.1;lineage3.1.2.2 1
La3;lineage2.1;lineage4.9 1
lineage2.2.1;lineage4 1
lineage4.8.1 1
lineage4.8 2
La1.2;La1.8.1 1
lineage4 1
lineage4.4.1.1 1
lineage4.4.1.2 1
lineage2.2 2
La1.7;lineage4.9 2
1
lineage4.3.2;lineage4.9 1
lineage4.9;lineage6.3 1
lineage4.4.1.1.1 1
M.canetti;lineage4.9;lineage9 1
La2;lineage4.9 1
lineage3 2
lineage4.1.2.1 1
M.canetti;lineage1 1
spoligotype Counts
spoligotype Count
None 67
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1172310 HR-TB lineage4.9 None
ERR9787014 Other lineage6.1.1 None
SRR1180444 Sensitive lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR970449 RR-TB lineage4.1.1.3 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4816874 HR-TB lineage2.2.1 gb
ERR176643 Other La3;lineage4.9 None
ERR3799304 Other lineage6.1.1 None
SRR1180413 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR245675 Sensitive lineage1.1.2 None
SRR10808730 Other lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR1181289 Other lineage2.2.1 None
ERR4769530 RR-TB lineage4.9 None
SRR29096410 Other lineage4.9 None
SRR1180137 Other lineage2.2.1 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR9971150 RR-TB lineage4.8.1 None
ERR736856 Sensitive lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR7240033 Other La1.2;La1.8.1 None
SRR1181349 Sensitive lineage4 None
ERR11466416 Sensitive lineage4.4.1.1 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR3797065 RR-TB lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR1183111 HR-TB lineage4.9 None
ERR11466382 Sensitive lineage4.1.1.3 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR987722 MDR-TB None
ERR212033 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR16156804 Sensitive lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR1049675 HR-TB lineage2.2.1 None
SRR29097026 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR1183049 RR-TB lineage2.2 None
SRR1062919 HR-TB lineage2.2.1 None
ERR323039 HR-TB La2;lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR2229357 Sensitive lineage4.8 dk
SRR16156817 Other lineage4.9 None
ERR4798504 RR-TB lineage3 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR6866125 Sensitive lineage4.1.2.1 None
SRR15014655 Other M.canetti;lineage1 None
SRR29096150 Other lineage4.9 None
ERR990545 Other lineage3 None
SRR8217918 HR-TB lineage4.9 None
ERR176751 Other lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None