Rv0668 - c.-168A>C
Drug resistance types
23 Sensitive
2 RR-TB
88 HR-TB
15 MDR-TB
2 Pre-XDR-TB
1 XDR-TB
41 Other
lineage Counts
| lineage | Count |
|---|---|
| 70 | |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage4.1 | 3 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.3.4 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage4 | 15 |
| lineage1.2.1.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.8 | 2 |
| lineage3.1.3 | 1 |
| lineage2.2.1 | 11 |
| lineage4.1.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.1.2.1 | 9 |
| lineage4.9 | 15 |
| lineage3.1 | 2 |
| lineage1.1 | 1 |
| lineage4.6.2.2 | 2 |
| lineage5.2 | 2 |
| lineage2.2 | 6 |
| La2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.6.1.1 | 3 |
| La1.8.1 | 2 |
| lineage6.1.1 | 2 |
| lineage3 | 4 |
| lineage3.1.2 | 1 |
| lineage4.3.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.8;lineage4.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage1.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 172 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6325445 | HR-TB | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR1035239 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675545 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675383 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675510 | Other | None | SRR3675486 | HR-TB | None | ERR181744 | HR-TB | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR176740 | HR-TB | None | ERR212034 | HR-TB | None | ERR212001 | HR-TB | None | ERR212123 | Other | None | SRR3675558 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR212121 | HR-TB | None | SRR3675574 | HR-TB | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4816656 | HR-TB | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR2446566 | Other | lineage4.1 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR1035138 | MDR-TB | None | ERR2229143 | Other | lineage4.1.1 | None | ERR4818929 | HR-TB | None | ERR4818252 | Other | lineage4.1.1.2 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR2514692 | Other | None | ERR2514821 | Other | lineage2.2.1 | None | ERR2693239 | HR-TB | None | SRR5341470 | HR-TB | None | SRR6046133 | HR-TB | None | ERR278594 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045526 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6325442 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6045158 | Other | lineage4.9 | None | SRR6045327 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6045320 | Other | lineage4.9 | None | SRR6325444 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6046594 | HR-TB | lineage4 | None | SRR6325447 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR294248 | HR-TB | None | ERR323036 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR323038 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311099 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR8217918 | HR-TB | None | ERR323055 | HR-TB | None | SRR7535086 | Other | None | ERR323039 | HR-TB | None | ERR323041 | HR-TB | None | ERR323053 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR323063 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR067699 | HR-TB | lineage4 | None | ERR3468544 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283017 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797016 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797036 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797083 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4188350 | HR-TB | None | ERR4188247 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6358837 | HR-TB | None | ERR736848 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6866410 | Sensitive | None | ERR6359045 | HR-TB | None | ERR6866547 | Sensitive | lineage4 | None | ERR736839 | Other | None | ERR736856 | HR-TB | lineage4 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR736865 | HR-TB | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR8976043 | HR-TB | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786843 | Other | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR990545 | Other | lineage3 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1183049 | Other | lineage2.2 | None | SRR14801749 | Sensitive | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR13861434 | RR-TB | lineage4.9 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13861666 | Sensitive | lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR1640750 | HR-TB | None | SRR17658565 | Other | lineage3 | None | SRR19295647 | Sensitive | lineage4.9 | None |
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