lineage | Count |
---|---|
23 | |
lineage4.9 | 56 |
lineage4 | 32 |
lineage2.2.1 | 10 |
lineage4.9.1 | 1 |
lineage3 | 3 |
La1.3 | 1 |
lineage4.9;La1.3 | 1 |
lineage2.2 | 2 |
lineage1.1.2 | 1 |
lineage4.5 | 2 |
lineage4.6.2.2 | 2 |
lineage4.1.2.1 | 2 |
lineage4.8;lineage4.1 | 2 |
lineage4.8 | 2 |
La1.8.1 | 1 |
lineage2.2.1.1 | 2 |
lineage4.2.1 | 3 |
lineage4.1 | 1 |
lineage3.1.3 | 1 |
lineage5.1.4 | 1 |
lineage4.3.3 | 1 |
lineage4;lineage2 | 1 |
lineage1.1.1 | 1 |
lineage4.2.1.1 | 1 |
spoligotype | Count |
---|---|
None | 153 |
ID | Drug resistance | Lineage | Country iso2 | ERR3439432 | Other | None | ERR502889 | Other | None | ERR502943 | HR-TB | None | ERR037234 | Sensitive | lineage4.9 | None | ERR067681 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR1063855 | Other | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR133986 | HR-TB | None | ERR3283021 | HR-TB | None | SRR9971114 | Other | lineage2.2.1 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR4596902 | HR-TB | lineage3 | None | ERR3797047 | HR-TB | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR4769442 | HR-TB | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4797313 | HR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4798406 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR6358951 | HR-TB | lineage4 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR990545 | Other | lineage3 | None | ERR9786843 | Other | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR11462861 | Other | La1.8.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR8692885 | Other | lineage4.9 | None | SRR8692858 | Sensitive | lineage4.9 | None | SRR8692897 | Other | lineage4.9 | None | SRR8692893 | Other | lineage4.9 | None | SRR8692791 | Other | lineage4.9 | None | SRR8692771 | Other | lineage4.9 | None | SRR8692887 | Other | None | SRR3675522 | Other | None | SRR8692899 | Other | lineage4.9 | None | ERR158583 | HR-TB | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | SRR3675229 | Other | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675279 | Other | None | SRR3675318 | Other | lineage4.9 | None | SRR3675387 | Sensitive | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR8692888 | Other | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675502 | Other | None | ERR4815471 | Other | lineage4.9 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | ERR4816964 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675550 | Other | None | SRR3675547 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4819357 | Other | lineage4.9 | None | ERR212138 | HR-TB | lineage4 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR1035162 | Other | None | ERR2513283 | Other | lineage5.1.4 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5341396 | Other | lineage4 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341418 | Other | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341323 | Sensitive | lineage4 | None | ERR1023509 | Other | None | ERR4819933 | Other | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | SRR6045664 | Other | lineage4.2.1 | None | ERR2517475 | Other | lineage4 | None | ERR4821655 | Sensitive | lineage4 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045158 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4828628 | MDR-TB | lineage4.5 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR6046824 | HR-TB | None | ERR4831638 | Sensitive | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR6832787 | RR-TB | lineage2.2.1 | None |
---|