Rv0006 - c.486G>A
Drug resistance types
27 Sensitive
3 RR-TB
61 HR-TB
5 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;La1 | 1 |
| La1.7.1 | 1 |
| 59 | |
| lineage4.2;La1.7 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.8 | 2 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4 | 22 |
| lineage4.9 | 9 |
| lineage2.2.1 | 7 |
| lineage4.6.2.2 | 2 |
| La2 | 1 |
| lineage2.2 | 6 |
| lineage4.3.4.1 | 2 |
| lineage4.4.1.2 | 1 |
| lineage4.6.1.1 | 3 |
| lineage4.3.3 | 1 |
| La1.8.1 | 1 |
| lineage4.1.2.1 | 2 |
| La1 | 1 |
| lineage3.1.2 | 1 |
| lineage3 | 3 |
| lineage4.5 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.8;lineage4.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.2.1 | 1 |
| lineage1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 135 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR23961542 | Other | lineage4.9;La1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR3675502 | Other | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR4816151 | Other | lineage4.8 | None | ERR158583 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675312 | HR-TB | lineage4 | None | ERR176740 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3675550 | Other | None | SRR3675574 | HR-TB | None | SRR5341418 | Other | None | ERR1035162 | Other | None | ERR4818607 | Sensitive | lineage4.9 | None | SRR5341456 | Other | None | ERR4818929 | HR-TB | None | ERR2514821 | Other | lineage2.2.1 | None | ERR1035138 | MDR-TB | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR6045450 | Other | lineage4.9 | None | SRR5341470 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR6045526 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045399 | Other | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6045233 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046397 | Other | None | SRR6046482 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046802 | Other | lineage4 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR502524 | HR-TB | La2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6832249 | Other | lineage2.2.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR502889 | Other | None | ERR323053 | HR-TB | None | ERR323039 | HR-TB | None | ERR1034652 | Other | None | ERR067681 | HR-TB | None | ERR1063859 | HR-TB | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR133986 | HR-TB | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR108471 | HR-TB | lineage4 | None | ERR3283025 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283047 | HR-TB | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3468728 | Other | La1.8.1 | None | ERR3445504 | HR-TB | None | ERR3439432 | Other | None | ERR363426 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797046 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797036 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797079 | Sensitive | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797087 | Sensitive | lineage4 | None | ERR4769521 | HR-TB | None | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4798262 | HR-TB | La1 | None | ERR4798431 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798504 | Other | lineage3 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6866807 | HR-TB | lineage4 | None | ERR6866410 | Sensitive | None | ERR6865502 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR702404 | HR-TB | None | ERR736865 | HR-TB | None | ERR752229 | Other | lineage4.5 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | ERR9119669 | HR-TB | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786843 | Other | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR10808399 | Sensitive | lineage4 | None | ERR990545 | Other | lineage3 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR1172310 | HR-TB | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR14801749 | Sensitive | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR14801402 | RR-TB | lineage4.8 | None | SRR17832802 | HR-TB | lineage3 | None | SRR16157123 | Other | lineage4.9 | None |
|---|
