Rv0006 - c.468C>T


Drug resistance types
2 Sensitive 16 RR-TB 16 HR-TB 32 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 22 Other
lineage Counts
lineage Count
La3;lineage4.9 6
lineage4.9 21
M.canetti;lineage4.9 3
La1.8.1 1
M.canetti;lineage4.2;lineage4.9 2
La1;lineage4.9 1
lineage4.6.2.2 2
lineage4.9;lineage9 3
M.canetti;lineage1 1
lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 2
lineage2.2.1 3
lineage2.2.1.1 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;lineage2.1;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
M.canetti;lineage4.6.4;lineage4.9 1
La2;lineage2.2 1
lineage3 4
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.8 2
lineage4.3.2;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage5.2 2
lineage4.2;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.9;lineage9 1
2
lineage2.2 1
La1.6;La3;M.canetti;lineage4.2.2 1
lineage4.9;lineage6.3 2
La2;lineage4.9 2
lineage4.1;lineage4.8 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.2.2 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La2;lineage4.9;lineage9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
M.canetti;lineage4.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 89
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR11252612 Other La3;lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
SRR3675441 RR-TB lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR23961542 Other La1;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR323066 HR-TB lineage4.9 None
ERR124636 HR-TB lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR15014655 Other M.canetti;lineage1 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR2446566 Other lineage4.9 None
SRR3675585 HR-TB lineage4.9 None
ERR176751 HR-TB lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675246 Other lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR1180137 RR-TB lineage2.2.1 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR3439432 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4798504 RR-TB lineage3 None
SRR6832787 Other lineage2.2.1 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR990545 RR-TB lineage3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR2229191 Sensitive lineage4.8 dk
SRR17832802 HR-TB lineage3 None
SRR1169306 Other La3;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1181289 RR-TB lineage2.2.1 None
SRR19295647 HR-TB lineage4.9 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR9119500 MDR-TB lineage5.2 None
SRR1165628 Other La3;lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR9786843 Other None
ERR11252736 Other lineage4.9 None
ERR987722 MDR-TB None
SRR28044873 Pre-XDR-TB lineage3 None
ERR6866807 RR-TB lineage4.9 None
ERR212033 Other lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR7535082 Other lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR4799025 Other lineage4.8 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR1063846 HR-TB lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR1034634 HR-TB lineage4.9 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None