lineage | Count |
---|---|
43 | |
lineage4 | 25 |
lineage4.3.4.1 | 1 |
lineage2.2 | 6 |
lineage2.2.1 | 8 |
lineage4.9 | 22 |
lineage4.5 | 1 |
lineage2.2.1.2 | 2 |
lineage4.6.2.2 | 2 |
lineage7;lineage2.2.1.2 | 1 |
lineage4.1 | 1 |
lineage4.1.1.3 | 1 |
lineage2.1 | 1 |
lineage4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 115 |
ID | Drug resistance | Lineage | Country iso2 | ERR1034652 | Other | None | ERR323108 | HR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283024 | Other | None | ERR387051 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797046 | HR-TB | None | ERR3797061 | Other | None | ERR349296 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797044 | Other | None | ERR400320 | Sensitive | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR4797313 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811493 | HR-TB | None | ERR4811030 | Sensitive | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | ERR6866807 | HR-TB | lineage4 | None | SRR10809074 | Sensitive | lineage4 | None | ERR4812155 | Sensitive | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR26399255 | Sensitive | lineage2.2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675229 | Other | lineage4 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675488 | HR-TB | None | SRR3675222 | Other | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675234 | Other | None | SRR3675247 | Other | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675279 | Other | None | SRR3675501 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR5341293 | HR-TB | lineage4 | None | SRR3675555 | HR-TB | None | ERR2512770 | Other | lineage4.2.1 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341315 | Sensitive | None | ERR2693232 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2693231 | Other | None | ERR2693230 | Other | None | ERR2693257 | Other | None | ERR2693254 | Other | None | SRR6045053 | Other | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045519 | HR-TB | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6046046 | Other | None | SRR6046253 | HR-TB | lineage4.9 | None | ERR4830353 | Other | None | SRR6046492 | Other | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831638 | Sensitive | None | ERR502943 | HR-TB | None |
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