lineage | Count |
---|---|
lineage6.1.1 | 2 |
lineage4.9 | 14 |
lineage4.3.2;lineage4.9 | 1 |
lineage1.2.1.2 | 1 |
lineage2.2.1 | 3 |
lineage3 | 3 |
lineage4.1;lineage4.8 | 2 |
lineage4.6.2.2 | 2 |
lineage4.9;lineage9 | 2 |
M.canetti;lineage4.9 | 1 |
La2;lineage4.9;lineage9 | 1 |
lineage4 | 1 |
2 | |
lineage4.9;lineage6.3 | 1 |
lineage3.1.2.2 | 1 |
lineage4.1.2.1 | 1 |
La1.7;M.canetti;lineage4.9 | 2 |
lineage3.1.2.1;lineage3.1.2.2 | 1 |
lineage4.1.1.3 | 2 |
lineage2.2 | 1 |
La2;lineage4.9 | 1 |
lineage4.7 | 1 |
spoligotype | Count |
---|---|
None | 46 |
ID | Drug resistance | Lineage | Country iso2 | ERR3799304 | Other | lineage6.1.1 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR12006550 | Sensitive | lineage1.2.1.2 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR9896144 | Other | lineage3 | None | SRR1181020 | Other | lineage2.2.1 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR990545 | Other | lineage3 | None | ERR4816478 | HR-TB | lineage4 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR9786843 | Other | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR1181289 | Other | lineage2.2.1 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR4798504 | RR-TB | lineage3 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR987722 | MDR-TB | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | ERR4819241 | Other | lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR9786507 | RR-TB | lineage4.7 | None |
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