Rv0006 - c.2097T>C
Drug resistance types
25 Sensitive
1 RR-TB
97 HR-TB
12 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
72 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.2 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4 | 17 |
| 112 | |
| lineage4.3.4 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.1.3 | 2 |
| lineage4.3.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage6.3.1 | 1 |
| lineage3 | 3 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.3.3 | 1 |
| lineage4.9 | 29 |
| lineage2.2.1 | 10 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 5 |
| lineage4.4.1.1.1 | 1 |
| lineage3.1 | 2 |
| lineage1.2.1.2 | 1 |
| lineage4.5 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage2 | 2 |
| lineage4.9;La3 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.8 | 1 |
| La1.8.1 | 1 |
| lineage4.1 | 1 |
| La1 | 1 |
| lineage3.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 211 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6198317 | Other | La1.2 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR736856 | HR-TB | lineage4 | None | ERR6358991 | HR-TB | None | ERR6359066 | HR-TB | lineage4 | None | ERR702406 | HR-TB | None | ERR6866410 | Sensitive | None | ERR6866807 | HR-TB | lineage4 | None | ERR702404 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736874 | HR-TB | None | ERR736865 | HR-TB | None | ERR736867 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9117709 | HR-TB | None | ERR9786604 | Other | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9119669 | HR-TB | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR9786843 | Other | None | ERR9787197 | Other | None | ERR9787139 | Other | lineage6.3.1 | None | ERR990545 | Other | lineage3 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987722 | HR-TB | None | SRR1169194 | Other | None | SRR10808399 | Sensitive | lineage4 | None | SRR1172234 | Other | None | SRR1172310 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172857 | MDR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173118 | Other | None | SRR1173153 | HR-TB | None | SRR1173363 | HR-TB | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173629 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173778 | Other | None | SRR1173788 | Other | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1174897 | HR-TB | None | SRR1175074 | MDR-TB | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184294 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184381 | MDR-TB | None | SRR1184388 | Other | None | SRR1184380 | HR-TB | None | SRR1196546 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR12142341 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR15368973 | Other | None | SRR14801749 | Sensitive | None | SRR12416824 | HR-TB | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR18213713 | HR-TB | lineage4.5 | None | ERR4815604 | HR-TB | None | SRR25827682 | Other | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR26159043 | Other | lineage4.9 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR3675465 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR176643 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675234 | Other | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675221 | HR-TB | None | ERR4816656 | HR-TB | None | ERR212033 | HR-TB | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR3742665 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR176751 | HR-TB | None | ERR4817060 | RR-TB | None | SRR3675574 | HR-TB | None | ERR212121 | HR-TB | None | SRR3675571 | HR-TB | None | ERR2229294 | Other | lineage4.8 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818021 | Other | La1.8.1 | None | ERR2446566 | Other | lineage4.1 | None | ERR4819051 | Other | lineage4 | None | ERR234659 | HR-TB | None | ERR4818615 | Other | None | ERR4818929 | HR-TB | None | SRR5341302 | HR-TB | None | ERR2514692 | Other | None | ERR4819781 | Other | lineage2.2.1 | None | ERR2514821 | Other | lineage2.2.1 | None | SRR5341333 | HR-TB | None | ERR2693230 | Other | None | ERR2693231 | Other | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341470 | HR-TB | None | SRR6045503 | HR-TB | None | ERR2693257 | Other | None | SRR6045526 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046141 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044780 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6044838 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6045010 | Other | lineage4 | None | SRR6044855 | Other | lineage4.9 | None | SRR6044918 | Sensitive | lineage4.9 | None | SRR6046066 | HR-TB | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046210 | Other | lineage4 | None | SRR6045327 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6045399 | Other | None | SRR6046225 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | SRR6046397 | Other | None | ERR4830353 | Other | None | SRR6046644 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR7496509 | Other | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6789626 | Other | None | ERR502532 | HR-TB | None | ERR323043 | HR-TB | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1034652 | Other | None | ERR1035157 | Other | lineage4.9 | None | ERR133825 | Sensitive | lineage4 | None | ERR1063857 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3797036 | HR-TB | None | ERR3283024 | Other | None | ERR3283036 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283027 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797017 | Other | None | ERR5336148 | Other | None | ERR3797044 | Other | None | ERR3797069 | Other | None | ERR3797061 | Other | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4407463 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769452 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4800341 | Other | lineage3 | None | ERR4811142 | MDR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811105 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None |
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