Rv0006 - c.2097T>C


Drug resistance types
11 Sensitive 4 RR-TB 39 HR-TB 17 MDR-TB 1 Pre-XDR-TB 1 XDR-TB 78 Other
lineage Counts
lineage Count
lineage3.1.2.1;lineage3.1.2.2 1
M.canetti;lineage4.9;lineage9 1
lineage6.3.1 1
lineage4.1.1.3 2
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage2.1;lineage6.3 2
La1.7;lineage4.9 4
lineage4.9 33
La1.7 1
La2;lineage4.9 2
lineage4.9;lineage9 2
M.canetti;lineage1 1
lineage4.1.1.1 1
lineage4.9;lineage6.3 7
lineage3 3
La1;lineage4.9 1
lineage4.1.3 2
M.canetti;lineage4.9 3
lineage2.1;lineage4.9 10
10
lineage4.8.1 1
La3;lineage4.9 2
lineage4.4.1.1 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.1.2.1 2
lineage2.1;lineage4.9;lineage6.3 7
La1.7;M.canetti;lineage4.9 4
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1 1
lineage2.2.1 5
lineage1.2.1.2 1
La1.6;lineage4 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage2.2 3
La2;lineage2.2 1
M.canetti;lineage2.1;lineage4.9 2
La3;lineage2.1;lineage4.9;lineage6.3 2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage2.2.1;lineage6.3 1
La2;lineage4.9;lineage9 1
La3 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.6.3;lineage4.9 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.3.4 1
La3;lineage2 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2.1;lineage4.9 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.2.1;lineage3 1
lineage3.1.2.2 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4 1
lineage4.3.4.2 1
La1.7;lineage4.2 1
lineage4.2;lineage4.6.3;lineage4.9 1
La1.2.BCG;La1.8.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 151
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR9787139 Other lineage6.3.1 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR3675501 Other La1.7;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
SRR6045548 Sensitive lineage4.9 None
ERR4830353 Other La1.7 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR2446566 Other lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR15014655 Other M.canetti;lineage1 None
SRR29096150 Other lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR1165699 Other lineage4.9 None
ERR4800341 Other lineage3 None
ERR4817731 HR-TB lineage4.9 None
SRR28119777 Other lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR7496509 Other None
ERR736867 Other lineage2.1;lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR29017461 Other La3;lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR1183111 HR-TB lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9786843 Other None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR234659 Other None
SRR12142341 HR-TB lineage2.1 None
SRR1181289 Other lineage2.2.1 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR28351554 Sensitive La1.6;lineage4 None
SRR6045795 Sensitive lineage2.2.1 None
ERR6866807 Other lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675275 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR18213713 HR-TB None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR323039 HR-TB La2;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR29096879 Sensitive lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR1172728 RR-TB La3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR3675488 Other La1.7;lineage4.9 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR987722 MDR-TB None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1180226 HR-TB lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR736875 HR-TB lineage4.9 None
SRR6045555 Other lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
SRR29097026 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR736817 HR-TB lineage4.3.4 None
SRR20969677 HR-TB La3;lineage2 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR1183049 RR-TB lineage2.2 None
SRR26399973 Other La3;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR3675267 Other La1.7;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
SRR26159043 Other lineage4.9 None
SRR6789626 Other None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4797588 MDR-TB lineage3 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4815441 HR-TB lineage4.9 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR990545 Other lineage3 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4816478 HR-TB lineage4 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1172817 Other La3 None
SRR12416840 MDR-TB lineage4.9 None
ERR9786346 Sensitive lineage4.3.4.2 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR23961559 Other La1.7;lineage4.2 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR1184294 Other lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR2514692 Other None
SRR25827682 Other None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR29096410 Other lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR4818929 HR-TB lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR1172310 HR-TB lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None