EBG00000313339 - n.1981C>T
Drug resistance types
21 Sensitive
4 RR-TB
102 HR-TB
16 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
109 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 23 |
| 84 | |
| lineage4.3.4.2 | 1 |
| lineage4 | 8 |
| lineage4.3.4 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.3.3 | 3 |
| lineage4.9 | 41 |
| lineage4.3.2 | 3 |
| La1 | 1 |
| La1.8.1 | 3 |
| lineage4.1.3 | 2 |
| lineage2.2.1 | 30 |
| lineage4.8 | 2 |
| La1.2 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage1.1.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage2.2 | 6 |
| lineage4.6.4 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.7 | 3 |
| lineage4.1.1 | 2 |
| lineage4.8;lineage4.1 | 2 |
| lineage3 | 2 |
| lineage6.2.3 | 1 |
| lineage6 | 1 |
| lineage2.2.2 | 1 |
| lineage4.4.1.1 | 1 |
| La3 | 1 |
| lineage2.2.1.1 | 4 |
| lineage1.2.1.2 | 1 |
| lineage4.5 | 2 |
| lineage1.2.1.2.1 | 1 |
| La1.7.1 | 2 |
| lineage4.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage3;lineage2.1 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.3 | 1 |
| lineage4.6.1.2 | 2 |
| lineage4.9.1 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage1.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage3.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 259 |
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR067681 | HR-TB | None | ERR1034902 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR10796635 | Other | lineage4 | None | ERR1035294 | MDR-TB | lineage4.1.2.1 | br | ERR1035300 | HR-TB | lineage4.1.2.1 | br | ERR10796631 | Other | lineage4.3.4 | None | ERR1034907 | Pre-XDR-TB | lineage4.3.4.1 | pt | ERR1035297 | MDR-TB | lineage4.3.4.1 | br | ERR1213875 | Other | lineage4.3.3 | de | ERR108471 | HR-TB | lineage4 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR1213930 | Other | lineage4.3.2 | pe | ERR3283017 | HR-TB | None | ERR133986 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283021 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283051 | Other | lineage4.9 | None | ERR3439432 | Other | None | ERR3797016 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797019 | Other | La1.8.1 | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR403298 | HR-TB | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797058 | Other | lineage4.9 | None | ERR3797063 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797069 | Other | None | ERR3797082 | Other | lineage4.9 | None | ERR3797083 | HR-TB | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4798406 | HR-TB | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR4188350 | HR-TB | None | ERR6198317 | Other | La1.2 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359045 | HR-TB | None | ERR6358837 | HR-TB | None | ERR6358951 | HR-TB | lineage4 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR751900 | Sensitive | lineage1.1.1 | th | ERR736839 | Other | None | ERR7821163 | Other | lineage2.2.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR7821126 | Sensitive | lineage1.1.3.2 | None | ERR9117709 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR8976043 | HR-TB | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9119508 | MDR-TB | lineage4.6.4 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786507 | Sensitive | lineage4.7 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR990545 | Other | lineage3 | None | ERR9787061 | Sensitive | lineage6.2.3 | None | ERR9787336 | Other | lineage6 | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1167384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1169249 | Other | La3 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1181328 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181251 | Other | lineage2.2.1 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR12416829 | MDR-TB | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR13423544 | Other | lineage4.5 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR13861146 | Sensitive | lineage4.9 | None | SRR13837484 | Other | lineage4.9 | None | SRR13837666 | Sensitive | lineage4.9 | None | SRR13861163 | Sensitive | lineage4.9 | None | SRR13861235 | HR-TB | lineage4.9 | None | SRR13861221 | Sensitive | lineage4.9 | None | SRR13861332 | Other | lineage4.9 | None | SRR13861261 | Sensitive | lineage4.9 | None | SRR13861288 | Other | lineage4.9 | None | SRR13861329 | Other | lineage4.9 | None | SRR13861396 | HR-TB | lineage4.9 | None | SRR13861372 | Other | lineage4.9 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861399 | Other | lineage4.9 | None | SRR13861400 | Other | lineage4.9 | None | SRR13861415 | Other | lineage4.9 | None | SRR13861413 | Sensitive | lineage4.9 | None | SRR13861424 | RR-TB | lineage4.9 | None | SRR13861575 | Other | lineage4.9 | None | SRR13861573 | Other | lineage4.9 | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR13861556 | Other | lineage4.9 | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR13861646 | Other | lineage4.9 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR1791696 | Other | La1.8.1 | None | SRR19303884 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18910194 | HR-TB | lineage2.2 | None | ERR4813861 | Other | lineage4.3.3 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR20632774 | Pre-XDR-TB | lineage2.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR158583 | HR-TB | None | SRR6325445 | HR-TB | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR1035239 | HR-TB | None | SRR3675465 | HR-TB | None | SAMN02585910 | Other | lineage2.2.1 | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675486 | HR-TB | None | SRR3675221 | HR-TB | None | ERR161149 | Other | lineage4.3.4.2.1 | mw | SRR3675383 | HR-TB | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR176643 | HR-TB | None | SRR3675311 | Other | None | ERR176568 | Other | lineage4.3 | None | ERR4815752 | Other | lineage4.9 | None | SRR3675502 | Other | None | ERR176751 | HR-TB | None | ERR4816999 | Other | None | ERR2027263 | Other | lineage4 | None | SRR3675574 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675550 | Other | None | ERR212033 | HR-TB | None | SRR3675572 | Other | None | ERR2124083 | HR-TB | lineage4.6.1.2 | None | ERR4816466 | HR-TB | None | ERR2124081 | MDR-TB | lineage4.6.1.2 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816585 | Other | lineage2.2 | None | ERR245758 | Other | lineage4.9.1 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | SRR7496472 | Other | None | ERR1035162 | Other | None | ERR2229143 | Other | lineage4.1.1 | None | ERR2513520 | Sensitive | lineage4.4.1.2 | gb | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR2509673 | Other | lineage2.2.1 | None | SRR5341418 | Other | None | ERR2514692 | Other | None | ERR4819781 | Other | lineage2.2.1 | None | ERR1023509 | Other | None | ERR4819932 | Other | lineage4.7 | None | ERR4821053 | Other | lineage3 | None | ERR2515228 | Other | lineage2.2.1 | None | ERR2693239 | HR-TB | None | SRR6045832 | HR-TB | lineage4.9 | None | ERR278594 | HR-TB | None | SRR6045526 | HR-TB | None | ERR4821179 | Other | lineage4.1.2.1 | gb | SRR6045555 | HR-TB | None | SRR6046141 | Other | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044855 | Other | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045327 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6046225 | HR-TB | None | ERR2815606 | Other | La1.7.1 | None | SRR6046362 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | SRR6325444 | HR-TB | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046514 | HR-TB | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR3275196 | Other | lineage2.2.1 | nl | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6325448 | HR-TB | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR6046540 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4872102 | MDR-TB | lineage4.6.4 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR3077978 | Other | lineage1.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6785227 | Other | lineage2.2.1 | None | SRR6831950 | Other | lineage4.3.3 | None | SRR6785263 | Sensitive | lineage2.2.1 | None | SRR6785267 | Other | lineage2.2.1 | None | SRR6785527 | Sensitive | lineage2.2.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6785413 | Other | lineage2.2.1 | None | ERR294248 | HR-TB | None | SRR6789626 | Other | None | ERR323034 | HR-TB | lineage3.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6982365 | Other | lineage2.2.1 | None | ERR323036 | HR-TB | None | ERR5311099 | HR-TB | None | ERR2199849 | Sensitive | lineage4.1.2.1 | de | ERR502532 | HR-TB | None | ERR502889 | Other | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | SRR7496509 | Other | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7496471 | Sensitive | None | SRR7496517 | Other | None | SRR7496523 | Other | lineage4.7 | None | ERR323038 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323041 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR323045 | HR-TB | None | ERR323055 | HR-TB | None |
|---|
