Rv3596c - c.1506C>G
Drug resistance types
11 Sensitive
1 RR-TB
9 HR-TB
7 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.9 | 13 |
| lineage4.6.2.2 | 2 |
| lineage4.3.4.2.1 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.2;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage3 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.3.4.2 | 1 |
| lineage2.2.1 | 3 |
| La1.8.1 | 1 |
| lineage4.1;lineage4.8 | 2 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.9;lineage9 | 1 |
| lineage4.1.2.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.2.BCG | 1 |
| 1 | |
| La1;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 43 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1183049 | RR-TB | lineage2.2 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR3797081 | Sensitive | lineage4.9 | None | ERR11465333 | Sensitive | lineage4.3.4.2.1 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR26399239 | Sensitive | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR28351347 | Other | lineage3 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR9786592 | Other | lineage4.3.4.2 | None | ERR6358979 | Other | lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR990545 | Other | lineage3 | None | SRR28351488 | MDR-TB | lineage2.2.1 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR2446566 | Other | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR13285191 | Sensitive | lineage4.9 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675246 | Other | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR29097066 | Sensitive | lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | ERR9786843 | Other | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR1181289 | Other | lineage2.2.1 | None | ERR13285192 | Sensitive | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
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