Rv0006 - c.1701C>T
Drug resistance types
6 Sensitive
1 RR-TB
7 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
12 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 5 |
| lineage3 | 3 |
| lineage4.9 | 7 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.6.2.2 | 2 |
| La3;lineage4.9 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4 | 3 |
| lineage2.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| 1 | |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 30 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1181020 | Other | lineage2.2.1 | None | SRR16370306 | Sensitive | lineage3 | None | SRR29052990 | Sensitive | lineage3 | None | ERR400345 | Other | lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR28119827 | Other | La3;lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR990545 | Other | lineage3 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1183049 | RR-TB | lineage2.2 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR7496471 | Sensitive | lineage4 | None | ERR9786526 | Other | lineage4.1 | None | ERR9786525 | Other | lineage4 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR9786843 | Other | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
|---|
