Rv0667 - c.2202C>G


Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
16 Sensitive 20 RR-TB 76 HR-TB 54 MDR-TB 1 Pre-XDR-TB 2 XDR-TB 78 Other
lineage Counts
lineage Count
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage4.9 47
La3;M.canetti;lineage2.1;lineage4.9 12
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
M.canetti;lineage2.1;lineage4 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
M.canetti;lineage2.1;lineage4.9 24
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.1.2.1 9
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage3 7
M.canetti;lineage2.2 3
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage4.4.1.2 1
lineage4.3.4.2.1 3
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
lineage4.1.1.3 2
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.3.2 1
lineage4 2
lineage6.1.1 2
lineage2.1;lineage4.3.2;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage4.6.2.2 2
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9 6
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage2.2.1 13
lineage1.2.1.2.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.1.1;lineage4.9 1
La1.7;M.canetti;lineage4.9 2
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1 1
La1.7;lineage4.9 2
9
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
M.canetti;lineage4.9 2
lineage4.4.1.1 2
lineage4.2;lineage4.6.3;lineage4.9 1
La3;M.canetti;lineage4.8;lineage4.9 1
La3;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.9 2
lineage2.2 2
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage4.6.3;lineage4.9 2
lineage3.1.2.1 2
lineage1.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.2.2 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.1.2.1.1 1
La2;lineage4.9;lineage9 1
lineage1.1.2;lineage4 1
lineage4.9;lineage7 3
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La1.7;lineage4.2 1
M.canetti;lineage4.2 1
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
M.canetti;lineage4.6.4;lineage4.9 2
M.canetti;lineage4.2;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La2;lineage4.9 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.9;lineage9 2
lineage4.3.4 1
La1.8.1 2
M.canetti;lineage4.3.1;lineage4.9 1
lineage4.1 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.1.1.1 1
La1.7.1 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.1;lineage3 1
lineage4.6.4;lineage4.9 1
lineage4.3.2;lineage4.9 1
lineage4.7 1
spoligotype Counts
spoligotype Count
None 247
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR387051 Other lineage4.9 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR3675482 Other lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR6045191 Sensitive lineage4.9 None
SRR1167055 Other lineage4.1.2.1 None
SRR1166821 Other lineage4.1.2.1 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR29097004 Other lineage3 None
SRR6045526 Other lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4821053 Other lineage3 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR772255 MDR-TB lineage4.3.2 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675582 Other lineage4.9 None
SRR7496471 Sensitive lineage4 None
SRR3675248 Other lineage4.9 None
ERR9787014 Other lineage6.1.1 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786525 Other lineage4 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR9896144 Other lineage3 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR2229143 RR-TB lineage4.9 None
ERR7821163 Other lineage2.2.1 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1510066 Other lineage1.2.1.2.1 None
SRR17832802 HR-TB lineage3 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046382 Sensitive lineage2.2.1 None
SRR6325442 HR-TB lineage4.1.1;lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SRR1180270 Other lineage2.2.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9786843 Other None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR2514692 Other None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR1162864 Other lineage4.1.2.1 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR2513229 MDR-TB lineage2.2.1 None
SRR1173453 Other lineage4.4.1.1 None
SRR13861322 Other lineage4.9 None
SRR1640750 Other None
SRR6046385 Sensitive lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR4796577 HR-TB None
SRR1180137 Other lineage2.2.1 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3468607 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6358979 Other lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1181020 Other lineage2.2.1 None
SRR3675269 RR-TB lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675446 RR-TB lineage4.9 None
ERR161034 Other lineage4.3.4.2.1 None
ERR176675 Sensitive lineage4.3.4.2.1 None
ERR2509673 Other lineage2.2.1 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR3077978 Other lineage1.1 None
ERR1063883 HR-TB lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR4797201 Other None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3799304 Other lineage6.1.1 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4816470 HR-TB lineage3 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR4798504 RR-TB lineage3 None
SRR3675280 RR-TB lineage4.9 None
ERR8976043 HR-TB lineage2.2 None
ERR990545 Other lineage3 None
ERR3283021 HR-TB lineage4.9 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR4817692 HR-TB lineage1.1.2;lineage4 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SAMN02414850 Other lineage4.1.2.1 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR23961559 Other La1.7;lineage4.2 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR987722 MDR-TB None
ERR234659 Other None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6044815 Other lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR1180226 HR-TB lineage4.9 None
SRR3675243 Other lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675507 Other lineage4.9 None
ERR11252736 Other lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR473323 HR-TB lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797083 RR-TB lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR323039 HR-TB La2;lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR323115 Sensitive lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR161039 Sensitive lineage4.3.4 None
ERR3797023 HR-TB La1.8.1 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR9786526 Other lineage4.1 None
SRR10315551 Sensitive lineage2.2.1 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR485006 HR-TB lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
SRR12006550 Sensitive None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR987729 HR-TB lineage3.1.2.1 None
ERR323037 Other lineage4.9 None
SRR1791696 Other La1.8.1 None
ERR4816466 HR-TB lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR6325447 HR-TB lineage4.1.1.1 None
ERR3797047 MDR-TB lineage4.9 None
SRR7240492 HR-TB La1.7.1 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR9971270 RR-TB lineage2.2.1 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6832787 Sensitive lineage2.2.1 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6832249 Sensitive lineage2.2.1 None
SRR3675494 RR-TB lineage4.9 None
SRR29097026 Other lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1165423 RR-TB lineage4.1.2.1 None
ERR176740 Other lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR736831 Other lineage4.9 None
SRR1165584 Other lineage4.1.2.1 None
SRR3675383 Sensitive lineage4.9 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
ERR212001 HR-TB None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR1181289 Other lineage2.2.1 None
SRR7496523 Other lineage4.7 None
SRR6046141 Other lineage4.9 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR29096410 Other lineage4.9 None
SRR6045832 Other lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1165506 Other lineage4.1.2.1 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None