Rv0667 - c.2202C>G
Drug resistance types
15 Sensitive
8 RR-TB
99 HR-TB
10 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
64 Other
lineage Counts
| lineage | Count |
|---|---|
| 76 | |
| lineage3 | 6 |
| lineage4.1.1.3 | 2 |
| lineage1.1.3 | 1 |
| lineage4.9 | 32 |
| lineage3.1.2.1 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage2.2.1 | 16 |
| lineage4.1.1 | 1 |
| lineage4.1.2.1 | 11 |
| lineage4.2.1 | 1 |
| lineage1.1 | 1 |
| lineage4 | 8 |
| lineage4.6.2.2 | 2 |
| lineage3.1 | 2 |
| lineage2.2 | 4 |
| lineage4.2.1.1 | 1 |
| La2 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.7 | 2 |
| lineage4.4.1.2 | 1 |
| La1 | 1 |
| La1.8.1 | 2 |
| lineage6.1.1 | 2 |
| lineage1.2.2.2 | 1 |
| lineage3.1.2 | 1 |
| lineage4.3.3 | 2 |
| lineage4.3.2 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.5 | 1 |
| lineage4.8;lineage4.1 | 2 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage2.2.2 | 1 |
| lineage2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.4.1.1 | 2 |
| lineage1.2.1.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.1 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage4.3.4 | 1 |
| lineage3;lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 200 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675545 | HR-TB | None | SRR3675550 | Other | None | ERR212001 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212034 | HR-TB | None | SRR3675558 | HR-TB | None | ERR4816470 | Other | lineage3 | None | SRR3675574 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816466 | HR-TB | None | ERR2513092 | Sensitive | lineage1.1.3 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR2514692 | Other | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR1035162 | Other | None | ERR234659 | HR-TB | None | ERR2229143 | Other | lineage4.1.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR2509673 | Other | lineage2.2.1 | None | SRR5341418 | Other | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341470 | HR-TB | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | SRR6045450 | Other | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045526 | HR-TB | None | ERR278594 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6046046 | Other | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR6045399 | Other | None | SRR6325442 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046514 | HR-TB | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6325448 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6832249 | Other | lineage2.2.1 | None | ERR294248 | HR-TB | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR502524 | HR-TB | La2 | None | ERR323036 | HR-TB | None | ERR502889 | Other | None | ERR5311081 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | SRR7585435 | Other | lineage4.9 | None | SRR7645928 | RR-TB | lineage4.7 | None | ERR323041 | HR-TB | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR323055 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323063 | HR-TB | None | ERR067681 | HR-TB | None | ERR1063855 | Other | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1063883 | Sensitive | lineage4 | None | ERR3283021 | HR-TB | None | ERR133986 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR3283008 | Other | lineage4.9 | None | ERR3283010 | Other | La1 | None | ERR3283017 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3439432 | Other | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797082 | Other | lineage4.9 | None | ERR4596910 | Sensitive | lineage4 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR387051 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4188350 | HR-TB | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4796577 | MDR-TB | None | ERR4798406 | HR-TB | None | ERR6358979 | Other | None | ERR6358837 | HR-TB | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR5908228 | Other | lineage4.3.3 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR752229 | Other | lineage4.5 | None | ERR8976043 | HR-TB | None | ERR176675 | Sensitive | lineage4.3.4.2.1 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9786843 | Other | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR9896144 | Other | lineage3 | None | ERR990545 | Other | lineage3 | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | SRR069989 | HR-TB | lineage2 | None | ERR987722 | HR-TB | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1174897 | HR-TB | None | SRR1183049 | Other | lineage2.2 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR13861153 | Other | lineage4.9 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR13837677 | Sensitive | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861568 | Other | lineage4.9 | None | SRR13861556 | Other | lineage4.9 | None | SRR13861663 | Sensitive | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR1640750 | HR-TB | None | SRR17832802 | HR-TB | lineage3 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | SRR13861660 | Sensitive | lineage4.9 | None | SRR1791696 | Other | La1.8.1 | None | SRR20632814 | Sensitive | lineage4 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | ERR161033 | HR-TB | None | ERR1035239 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675502 | Other | None | SRR3675486 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675383 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR176740 | HR-TB | None | SRR3675456 | HR-TB | None |
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