Rv3601c - c.162A>G
Drug resistance types
32 Sensitive
2 RR-TB
98 HR-TB
5 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| 99 | |
| lineage4.9 | 11 |
| lineage4.1.1.3 | 1 |
| lineage4 | 34 |
| lineage4.1.1.2 | 1 |
| lineage2.2.1 | 7 |
| lineage3 | 2 |
| lineage4.1.2.1 | 3 |
| lineage3.1 | 2 |
| lineage2.2 | 4 |
| lineage4.6.2.2 | 2 |
| La2 | 1 |
| lineage4.1.2 | 1 |
| La1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.5 | 1 |
| lineage4.3.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.1 | 2 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 177 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675387 | Sensitive | None | ERR176740 | HR-TB | None | SRR3675510 | Other | None | SRR3675522 | Other | None | SRR3675547 | Other | lineage4.9 | None | ERR212034 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212123 | Other | None | SRR3675558 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR212121 | HR-TB | None | ERR234659 | HR-TB | None | ERR4816656 | HR-TB | None | SRR5341461 | Sensitive | lineage4 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR752215 | Sensitive | lineage2.2.1 | th | SRR5341387 | Other | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | ERR2514821 | Other | lineage2.2.1 | None | SRR5341456 | Other | None | SRR5341330 | HR-TB | None | SRR5341467 | Other | lineage4 | None | SRR5341470 | HR-TB | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6045503 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6045519 | HR-TB | None | SRR6045053 | Other | None | SRR6045233 | HR-TB | None | SRR6046046 | Other | None | SRR6045327 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | SRR6325444 | HR-TB | None | ERR278594 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046299 | HR-TB | None | ERR4830353 | Other | None | SRR6046514 | HR-TB | None | SRR6046492 | Other | None | SRR6325448 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6325447 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR323036 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR502510 | Sensitive | lineage4 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR294248 | HR-TB | None | ERR5311081 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR5311090 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323055 | HR-TB | None | SRR8217918 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | ERR323038 | HR-TB | None | ERR323039 | HR-TB | None | ERR323041 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR323066 | Sensitive | lineage4 | None | ERR323053 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR1035122 | Sensitive | None | ERR323085 | Sensitive | lineage4 | None | ERR1034652 | Other | None | ERR1063857 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3283021 | HR-TB | None | ERR1063896 | Sensitive | None | ERR3283017 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3797082 | Other | lineage4.9 | None | ERR3445504 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR3468544 | HR-TB | None | ERR349296 | Sensitive | lineage4 | None | ERR3445501 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR4024991 | Other | None | ERR3797083 | HR-TB | None | ERR387051 | HR-TB | None | ERR400326 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4188350 | HR-TB | None | ERR4769452 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4769450 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797474 | Other | None | ERR4798262 | HR-TB | La1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6358837 | HR-TB | None | ERR4812155 | Sensitive | None | ERR4811030 | Sensitive | None | ERR6866807 | HR-TB | lineage4 | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR736865 | HR-TB | None | ERR702404 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736839 | Other | None | ERR751326 | Sensitive | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR8976043 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | ERR987722 | HR-TB | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1172310 | HR-TB | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1174897 | HR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR13861434 | RR-TB | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR1640750 | HR-TB | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR11972366 | Sensitive | lineage2.2.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR27450645 | MDR-TB | lineage3 | None | SRR3675455 | Sensitive | lineage4 | None | SRR6325445 | HR-TB | None | ERR176778 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR1035239 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675229 | Other | lineage4 | None | ERR181744 | HR-TB | None | SRR3675222 | Other | None | SRR3675246 | Sensitive | lineage4 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675279 | Other | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675318 | Other | lineage4.9 | None | SRR3675501 | HR-TB | None |
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