Rv0635 - c.-129C>G
Drug resistance types
3 Sensitive
4 RR-TB
59 HR-TB
24 MDR-TB
4 Pre-XDR-TB
3 XDR-TB
115 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 4 |
| La1;lineage4.9 | 1 |
| 15 | |
| lineage3 | 2 |
| lineage2.1 | 3 |
| lineage4.9 | 31 |
| lineage4.9;lineage6.3 | 7 |
| lineage4.3.3 | 4 |
| lineage2.1;lineage4.9 | 16 |
| M.canetti;lineage2.1;lineage6.3 | 2 |
| lineage3.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9 | 11 |
| M.canetti;lineage2.1;lineage4.9 | 11 |
| La3;M.canetti;lineage3.1 | 1 |
| M.canetti;lineage2.1 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 4 |
| lineage2.1;lineage4.9;lineage6.3 | 11 |
| lineage2.2.1 | 6 |
| lineage4.1.2.1 | 9 |
| M.canetti;lineage2.2 | 3 |
| La3;lineage4.9 | 6 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 2 |
| La3;M.canetti;lineage2.2.1 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage2.1;lineage6.3 | 2 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La3 | 2 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| La1.2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage2.2.2;lineage4 | 1 |
| lineage4.3.4.2.1 | 2 |
| La1.2.BCG;La1.8.1 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage1.1.2 | 1 |
| lineage2.2 | 2 |
| lineage4.9.1 | 1 |
| lineage4.7 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| La3;lineage1.1.2 | 1 |
| lineage2.2.2 | 1 |
| lineage4 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.1.3 | 2 |
| lineage4.8;lineage4.9 | 1 |
| La3;lineage2.2.1 | 1 |
| La3;lineage2.1;lineage4.9 | 3 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| lineage4.1.2 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| La3;lineage4.8 | 1 |
| La3;M.canetti;lineage2.1;lineage3.1 | 1 |
| lineage2.1;lineage4.3.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage3.1.1 | 1 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 212 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR23961542 | Other | La1;lineage4.9 | None | SRR7535086 | Other | None | ERR4800341 | Other | lineage3 | None | ERR702406 | Other | lineage2.1 | None | SRR1173400 | Other | lineage4.9 | None | SRR1172234 | Other | lineage4.9 | None | ERR176751 | Other | lineage4.9 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR6831950 | Sensitive | lineage4.3.3 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR8976043 | HR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR7496472 | Other | lineage4.9 | None | SRR3675320 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR1873393 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | ERR323041 | HR-TB | M.canetti;lineage2.1 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR25827682 | Other | None | ERR234659 | Other | None | SRR1173153 | Other | lineage4.9 | None | SRR28119752 | Other | lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4814352 | Other | lineage2.2.1 | None | SRR1162864 | Other | lineage4.1.2.1 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR1173633 | Other | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR6358837 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR038268 | HR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | SRR6045952 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1172951 | Other | lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR3675275 | Other | lineage4.9 | None | SRR18213713 | HR-TB | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR1175074 | Other | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173355 | Other | lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR3416776 | Other | lineage2.1 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | SRR1172728 | RR-TB | La3 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR6046594 | Sensitive | lineage4.9 | None | ERR9117709 | Other | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR3675450 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR323055 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1184294 | Other | lineage4.9 | None | SRR23961549 | Other | La1.2 | None | ERR323038 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR1184381 | MDR-TB | None | ERR212001 | HR-TB | None | ERR212033 | Other | lineage4.9 | None | SRR6789621 | Other | lineage4.9 | None | ERR473314 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR323047 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR323060 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1173778 | Other | lineage4.9 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR1196768 | MDR-TB | None | ERR176658 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1196583 | Other | lineage4.9 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR3675506 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR245758 | Other | lineage4.9.1 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR4819932 | Other | lineage4.7 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | SRR1169194 | Other | lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1196677 | Other | lineage2.2 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR126608 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1166821 | Other | lineage4.1.2.1 | None | SRR1173218 | Other | lineage4.3.3 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR323040 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1184312 | Other | lineage2.2.1 | None | SRR6045526 | Other | lineage4.9 | None | SRR3675486 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR1035157 | Other | lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | SRR14782054 | Other | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR323064 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6789626 | Other | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR176793 | Other | lineage4.1.1.1 | None | SRR3675236 | Other | None | ERR278594 | HR-TB | lineage2.1;lineage4.9 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR990545 | Other | lineage3 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR6045948 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1175049 | Other | lineage4.8;lineage4.9 | None | ERR176766 | HR-TB | lineage2.1;lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR1172817 | Other | La3 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR26937071 | MDR-TB | La3;lineage2.2.1 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR1165423 | RR-TB | lineage4.1.2.1 | None | SRR29050859 | Other | lineage4.9 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR386953 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR3675554 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR11252612 | Other | La3;lineage4.9 | None | SRR1172857 | Other | None | SRR6325442 | HR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR28119805 | Other | lineage4.9 | None | ERR124652 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR126600 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1184372 | MDR-TB | None | SRR3675558 | HR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | SRR3675568 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR4818347 | Other | lineage4.1.2 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR323063 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4817893 | Other | La3;lineage4.8 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR323058 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | SRR1710057 | Other | lineage2.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323034 | MDR-TB | La3;M.canetti;lineage2.1;lineage3.1 | None | ERR772255 | MDR-TB | lineage2.1;lineage4.3.2 | None | ERR323036 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1163221 | MDR-TB | lineage4.1.2.1 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4815604 | Other | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | SRR1173384 | Other | lineage4.9 | None | ERR4816999 | Other | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR1196474 | Other | lineage3.1.1 | None | SRR1196546 | Other | lineage4.9 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | SRR3675515 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1165699 | Other | lineage4.9 | None |
|---|
