Rv1630 - c.828C>G
Drug resistance types
37 Sensitive
17 RR-TB
23 HR-TB
21 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
71 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 60 |
| lineage2.2.1 | 12 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| lineage4.8 | 3 |
| La1.7;lineage4.9 | 5 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage4.1.1.3 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.2;lineage4 | 1 |
| La2;lineage4.9 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage4.6.2.2 | 2 |
| lineage5.2 | 2 |
| lineage3 | 5 |
| lineage4 | 2 |
| lineage6 | 2 |
| lineage4.2.2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| La1.2 | 1 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.6.4;lineage4.9 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| La1.7;M.canetti;lineage4.9 | 4 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La3;lineage4.9 | 6 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage1.1.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La1;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage4.2.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.3.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage4.6.1.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage4.1.1.1 | 1 |
| La1.7 | 2 |
| lineage4.1.2.1 | 2 |
| La2;lineage2.2 | 1 |
| lineage2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.3.4.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.1 | 1 |
| La2 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage2;lineage4 | 1 |
| lineage2.1 | 1 |
| 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 175 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675502 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | SRR1181289 | Other | lineage2.2.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | ERR12015084 | Other | lineage4.8 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR11252736 | Other | lineage4.9 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR212123 | Other | lineage4.9 | None | SRR5341366 | Sensitive | lineage4.9 | None | SRR29096879 | Sensitive | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR161037 | Other | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786525 | Other | lineage4 | None | ERR323037 | Other | lineage4.9 | None | ERR9787336 | RR-TB | lineage6 | None | SRR1181349 | Sensitive | lineage4 | None | SRR25827771 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR6832787 | Sensitive | lineage2.2.1 | None | SRR6832249 | Sensitive | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR11488822 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR23961549 | Other | La1.2 | None | SRR6982246 | Sensitive | lineage4.1.2;lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR11465333 | Sensitive | lineage4.3.4.2.1 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR4188322 | Other | lineage4.6.4;lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR3439432 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR1180137 | Other | lineage2.2.1 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR22251268 | Sensitive | lineage1.1.2 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR3675446 | RR-TB | lineage4.9 | None | SRR1169249 | Other | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR16157123 | Other | lineage4.9 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR990545 | Other | lineage3 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR7821163 | Other | lineage2.2.1 | None | SRR23961542 | Other | La1;lineage4.9 | None | SRR29096659 | Sensitive | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR29096387 | Sensitive | M.canetti;lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1;lineage4 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR176751 | Other | lineage4.9 | None | SRR28119843 | Sensitive | lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR11252664 | Other | lineage2.2.1 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR4820112 | Sensitive | lineage4.1.1.1 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4815079 | RR-TB | lineage3 | None | SRR28119823 | Sensitive | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4830353 | Other | La1.7 | None | SRR5341425 | Other | lineage4.9 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR11465802 | Other | La1.7;lineage4.3.4.1 | None | ERR11465665 | Other | lineage4.1.1.3 | None | ERR7821126 | Sensitive | lineage1.1.3.2 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR3797085 | Other | lineage4.9 | None | ERR9787030 | Sensitive | lineage6 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR9786526 | Other | lineage4.1 | None | ERR9896144 | Other | lineage3 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR13888750 | Other | La2 | None | SRR5341303 | Sensitive | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | SRR25827330 | MDR-TB | lineage4.8 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | SRR6046594 | Sensitive | lineage4.9 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR22251329 | Other | lineage2.1 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR9786843 | Other | None | ERR212001 | HR-TB | None | ERR212033 | Other | lineage4.9 | None |
|---|
