EBG00000313339 - n.286G>T


Drug resistance types
43 Sensitive 16 RR-TB 89 HR-TB 34 MDR-TB 10 Pre-XDR-TB 2 XDR-TB 173 Other
lineage Counts
lineage Count
lineage4.3.4.2.1 3
lineage6.3.1 1
lineage2.2.1 27
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage4.9;lineage6.3 7
lineage2.1;lineage4.9 11
lineage4.9 131
La3;lineage2.1;lineage4.9 3
M.canetti;lineage2.1;lineage4.9 2
lineage4.6.1.2 2
lineage4.8 9
La1.7;lineage4.9 1
lineage3 5
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.3.2.1 2
lineage4 6
La3;lineage4.9 7
lineage2.2.1;lineage6.3 1
lineage4.9;lineage6.1.3 1
lineage3.1 1
lineage4.5 2
lineage1.2.2.2 3
lineage4.1.2.1 18
lineage3.1.1 1
lineage4.6.2.2 5
lineage2.2.1.2;lineage7 1
lineage4.1;lineage4.8 2
lineage4.4.1.1 1
La3 2
lineage4.3.3 5
lineage4.1.3 2
lineage4.1 1
La3;lineage4.8 1
La1;lineage4.1.2 1
lineage4.9;lineage7 1
lineage4.2;lineage4.8.1;lineage4.9 1
lineage4.3.4.1 3
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage2.2 4
18
lineage4.1.1.1 4
lineage4.9;lineage6.3 5
La3;lineage2.1;lineage6.3 1
La1.2.BCG 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2.1;lineage4 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage2.2.1.1 5
La1;lineage2;lineage4.9 1
lineage4.3.4.2 1
lineage5.2 2
M.canetti;lineage4.2;lineage4.9 1
lineage4.3.2 2
M.canetti;lineage4.9 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1;lineage4.9 2
lineage2.1 3
M.canetti;lineage2.2.2;lineage6.2 2
La1.7;lineage4.2 1
lineage4.7 1
lineage1.1.3.1 1
lineage6.2.3 1
lineage4.1.1.3;lineage4.9 2
lineage4.1.1.3 4
La1.7.X-unk4;lineage4.9 1
lineage2.1;lineage6.3 1
lineage4.1.2 1
La3;lineage3 1
lineage4.6.1.1 1
La1.2;La1.8.1 1
lineage1.1.3.2 1
lineage1.1.1 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La3;lineage2 1
lineage4.8.1 1
La1.7 1
lineage4.2;lineage4.9 1
M.canetti;lineage2.1;lineage6.3 1
lineage6.1.3 1
M.canetti;lineage2.2 2
La1.7;M.canetti;lineage4.9 1
lineage4.2.1.1;lineage4.3.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.2.1 1
spoligotype Counts
spoligotype Count
None 367
Geographic prevalence
Country level data for this variant is available for 15 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR9787139 Other lineage6.3.1 None
ERR1213874 MDR-TB lineage2.2.1 kr
SRR6785413 Other lineage2.2.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR369151 Other lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18003019 Other lineage2.2.1 None
ERR2124083 HR-TB lineage4.6.1.2 None
ERR3275201 Sensitive lineage4.8 nl
SRR1169194 Other lineage4.9 None
ERR926165 Other lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
SRR7535082 Other lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR736848 Other lineage4.9 None
ERR990545 RR-TB lineage3 None
SRR5341300 HR-TB lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4799025 Other lineage4.8 None
ERR369161 Sensitive lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR2027263 Other lineage4 None
SRR16156817 Other lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4798823 HR-TB lineage4 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR323066 HR-TB lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR926158 Sensitive lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
ERR926160 Other lineage4.9 None
SRR6785227 Other lineage2.2.1 None
SRR13837915 Sensitive lineage4.9 None
ERR4811031 Other lineage4.5 None
ERR3283011 Other La3;lineage4.9 None
ERR349299 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR7496472 Other lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR1196474 Other lineage3.1.1 None
ERR323062 HR-TB lineage4.9 None
SRR6785263 Sensitive lineage2.2.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR363498 Other lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR1173153 Other lineage4.9 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
SRR3675221 Other lineage4.9 None
ERR2124081 MDR-TB lineage4.6.1.2 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR4819877 HR-TB lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR1172728 RR-TB La3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1035312 Pre-XDR-TB lineage4.3.3 br
ERR1035294 MDR-TB lineage4.1.2.1 br
ERR363445 Other lineage4.9 None
ERR363502 Other lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786440 Other lineage4.1 None
ERR12015083 Other La3;lineage4.8 None
SRR1165628 Other La3;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
ERR11081258 Other lineage4.8 None
ERR363447 Other lineage4.9 None
SRR1158918 Other lineage4.9 None
SRR1196546 Other lineage4.9 None
SRR28119741 Pre-XDR-TB lineage2.2.1 None
ERR9786711 Other lineage4.6.2.2 None
SRR1173777 Sensitive lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR7821163 Other lineage2.2.1 None
ERR1035315 Pre-XDR-TB lineage4.3.4.1 br
ERR3283018 HR-TB lineage4.9 None
ERR736834 HR-TB lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR926155 Other lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR7131023 Other lineage4.1.2.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341456 Other lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR1035300 HR-TB lineage4.1.2.1 br
ERR9786642 Other lineage4.1.2.1 None
ERR1063896 HR-TB None
SRR28351341 Other lineage4.1.1.1 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR9786604 Other None
ERR234659 HR-TB None
SRR1172857 Other None
SRR7496517 Other None
ERR9787197 Other None
SRR12708416 Sensitive None
ERR369162 Other lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR363449 Other lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR373945 Other lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR502908 HR-TB lineage2.2.1 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR2693252 HR-TB lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1183049 RR-TB lineage2.2 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR1035296 HR-TB lineage4.9 br
ERR9786619 Sensitive lineage4.8 None
ERR349296 Sensitive lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR4817896 HR-TB lineage2.2.1 None
SRR20969708 HR-TB lineage2.2 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR9786569 Other lineage4.8 None
ERR9896144 Other lineage3 None
SRR1167384 Other La3;lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR20969731 Other lineage2.2.1 None
ERR363506 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR1035295 MDR-TB lineage4.1.2.1 br
SRR15600376 HR-TB lineage2.2.1.1 None
ERR369163 Other lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
ERR11138607 Pre-XDR-TB lineage2.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR1035297 MDR-TB lineage4.3.4.1 br
ERR3283019 Other lineage2.1;lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
ERR1034902 Pre-XDR-TB lineage4.3.4.2 pt
ERR349265 Other lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR124636 HR-TB lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR1173400 Other lineage4.9 None
SRR1173384 Other lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR553132 MDR-TB lineage4.1.2.1 None
ERR4872094 MDR-TB lineage5.2 None
ERR4815441 HR-TB lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4796584 Sensitive lineage1.2.2.2 None
ERR176793 Other lineage4.1.1.1 None
ERR2446566 Other lineage4.9 None
ERR926163 Other lineage4.9 None
ERR751326 Other lineage4.9 None
ERR1213930 Other lineage4.3.2 pe
ERR3797070 Other lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR323107 HR-TB lineage4.9 None
SRR1196566 Other lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR4817731 HR-TB lineage4.9 None
ERR2446570 Sensitive lineage4.8 nl
ERR3801503 Other lineage4.6.2.2 None
SRR12708409 HR-TB lineage4.3.3 None
SRR5341453 Other lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
ERR3283042 HR-TB lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR133825 HR-TB La1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR363453 Other lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR1180137 RR-TB lineage2.2.1 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR12416840 MDR-TB lineage4.9 None
ERR970413 MDR-TB lineage2.2.1 None
SRR1172817 Other La3 None
SRR23961559 Other La1.7;lineage4.2 None
ERR363500 Other lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
SRR1183144 RR-TB lineage2.2.1 None
ERR4819241 Other lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR1915487 Other La1.2.BCG None
ERR9786645 Other lineage4.6.2.2 None
ERR970445 MDR-TB lineage2.2.1 None
SRR7496523 Other lineage4.7 None
ERR9786617 Other lineage4.1.1.1 None
ERR926161 Sensitive lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR108125 RR-TB lineage4.9 None
SRR1173788 Sensitive lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR9786671 Other None
SRR1173363 Other None
ERR11252612 Other La3;lineage4.9 None
SRR1184372 MDR-TB None
SRR28044634 Other lineage3 None
ERR4407463 HR-TB None
SRR28119805 Other lineage4.9 None
ERR9787061 Sensitive lineage6.2.3 None
SRR1196583 Other lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR779852 HR-TB lineage4.9 None
ERR4800341 HR-TB lineage3 None
ERR1035316 MDR-TB lineage4.3.2 br
ERR2517514 Sensitive lineage4.8 None
ERR369157 Sensitive lineage4.9 None
SRR10808668 Other lineage2.2.1 None
ERR363421 Other lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR702405 HR-TB lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR212033 Other lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR11465025 Other lineage4.1.1.3 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4820773 HR-TB lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
ERR176549 Other lineage4.3.4.2.1 None
SRR1196677 Other lineage2.2 None
ERR702406 Other lineage2.1 None
ERR926156 Other lineage4.9 None
SRR1181020 Other lineage2.2.1 None
ERR1023302 MDR-TB La3;lineage3 None
ERR926154 Sensitive lineage4.9 None
ERR926157 Other lineage4.9 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR3283044 Other lineage4 None
ERR4799547 HR-TB lineage2.2.1 None
ERR067712 Sensitive lineage4.9 None
SRR1184312 Other lineage2.2.1 None
ERR6358755 Other lineage4.6.1.1 None
SRR15368973 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR373946 Other lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR1063883 HR-TB lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
SRR1173118 Other lineage2.2.1 None
SRR6789621 Other lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7496471 Sensitive lineage4 None
ERR4811030 Other lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR400326 Other lineage4.9 None
ERR3797043 Sensitive lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR3675318 Other lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
ERR7821123 Other lineage1.1.3.2 None
ERR3273109 HR-TB lineage4 None
ERR1213875 Sensitive lineage4.3.3 de
SRR6046540 Other lineage2.1;lineage4.9 None
SRR1172951 Other lineage4.9 None
SRR6045706 Other lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
SRR1165699 Other lineage4.9 None
SRR21732980 Other lineage4.3.3 None
ERR4596910 Sensitive lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR1181289 RR-TB lineage2.2.1 None
SRR10809074 HR-TB lineage4.9 None
ERR363490 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR11049020 Other lineage4.8 None
SRR14066533 RR-TB lineage1.1.1 None
ERR926164 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR6785267 Other lineage2.2.1 None
ERR9786694 Other lineage4.1.2.1 None
SRR3675514 Sensitive lineage4.9 None
ERR11466499 Other lineage4.3.4.1 None
ERR9119500 MDR-TB lineage5.2 None
SRR1172234 Other lineage4.9 None
SRR21658550 Other lineage1.1.1 None
SRR6458423 HR-TB lineage2.2.1 None
SRR20969677 HR-TB La3;lineage2 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR3675222 Other La1.7 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR369156 Sensitive lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR373947 Other lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR11465024 Other lineage4.1.1.3 None
ERR9787165 Other lineage6.1.3 None
ERR9786601 Other lineage4.1.2.1 None
SRR3675311 Other lineage4.9 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4819422 HR-TB lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR6045503 Other lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR4811493 HR-TB lineage4.9 None
ERR1035299 MDR-TB lineage4.1.2.1 br
ERR971389 Other lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
SRR7496509 Other None
SRR1184381 MDR-TB None
ERR9786843 Other None
SRR6789626 Other None
SRR7535086 Other None
SRR18213713 HR-TB None
ERR212001 HR-TB None
SRR28119777 Other lineage4.9 None
ERR752229 Other lineage4.5 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR3675549 Other lineage4.9 None
SRR6785262 Sensitive lineage4.2.1 None