Rv2477c - c.999G>C


Drug resistance types
19 Sensitive 2 RR-TB 23 HR-TB 11 MDR-TB 2 Pre-XDR-TB 2 XDR-TB 96 Other
lineage Counts
lineage Count
lineage4.9 42
La1.7;M.canetti;lineage4.9 1
14
lineage4.1.2.1 10
lineage2.2.1 7
lineage4.7 2
lineage4.1 1
lineage2.1;lineage4.9 10
lineage4.9;lineage6.3 3
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La1.7;lineage4.9 5
La1.7.X-unk4;lineage4.9 1
lineage2.2 2
La3;lineage4.9 4
lineage2.1;lineage4.9;lineage6.3 5
lineage2.2.2 1
lineage4.1;lineage4.8 2
lineage6.3.1 2
lineage1.1.2;lineage4 1
lineage4.6.2.2 3
M.canetti;lineage2.2.2;lineage6.2 2
lineage1.1.2 1
lineage4 3
lineage4.1.3 2
lineage2.1;lineage6.3 2
lineage2.1 1
M.canetti;lineage2.2 2
lineage4.8 3
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.4.1.1 1
lineage4.1.1.3 1
lineage4.3.2 1
La1;lineage4.9 1
lineage4.8.1 1
La1.2 1
lineage5.2 2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.2.BCG;La1.8.1 1
lineage4.5 1
La3;lineage2.1;lineage4.9 1
La2;lineage2.2 1
lineage3 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La2;lineage4.9 1
lineage1.1.3.2 1
lineage1.1.3.1 1
M.canetti;lineage4.9 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
spoligotype Counts
spoligotype Count
None 155
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3283018 HR-TB lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR9787197 Other None
ERR9786601 Other lineage4.1.2.1 None
ERR4819781 Other lineage2.2.1 None
SRR6785227 Other lineage2.2.1 None
SRR7496523 Other lineage4.7 None
ERR9786440 Other lineage4.1 None
ERR4815752 Other lineage4.9 None
SRR3675457 Other lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR3675385 Other La1.7;lineage4.9 None
SRR3675522 Other lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
ERR9119669 HR-TB lineage4.9 None
ERR9786627 Other lineage4.1.2.1 None
ERR3797048 Other La3;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1165628 Other La3;lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR18910194 HR-TB lineage2.2.2 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR3804162 Sensitive lineage6.3.1 None
ERR4769521 RR-TB lineage4.9 None
ERR4816999 Other None
ERR4817692 HR-TB lineage1.1.2;lineage4 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR926158 Sensitive lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR400326 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR8380944 Sensitive lineage1.1.2 None
ERR3283044 Other lineage4 None
ERR9787223 Sensitive lineage6.3.1 None
ERR3804169 HR-TB lineage4.1.3 None
ERR926164 Other lineage4.9 None
ERR9117709 Other None
ERR9786611 HR-TB lineage4.1.3 None
SRR3675549 Other lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR12416840 MDR-TB lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9786843 Other None
ERR11252664 Other lineage2.2.1 None
ERR212001 HR-TB None
ERR181824 HR-TB lineage4.9 None
ERR9786671 Other None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR1181289 Other lineage2.2.1 None
ERR9786604 Other None
SRR3675572 Other None
ERR6866807 Other lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
ERR3283042 Other lineage4.9 None
SRR1180137 Other lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR18213713 HR-TB None
SRR3675214 Other lineage4.9 None
ERR4817735 Other lineage4.8 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR4188247 HR-TB lineage4.9 None
SRR7496517 Other None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR1181020 Other lineage2.2.1 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR9786444 Sensitive lineage4.8 None
ERR736856 Sensitive lineage4.9 None
SRR6046066 Other lineage4.9 None
ERR2027263 Other lineage4 None
SRR6789626 Other None
SRR6046521 Other lineage4.4.1.1 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR926161 Sensitive lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
SRR3675236 Other None
ERR9117805 Other lineage4.3.2 None
SRR25395701 Sensitive lineage4.1.2.1 None
SRR23961542 Other La1;lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR7496509 Other None
ERR736867 Other lineage2.1;lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR23961549 Other La1.2 None
ERR3804155 Other lineage4.1.2.1 None
SRR7131023 Other lineage4.1.2.1 None
ERR3797070 Other lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675221 Other lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR4814352 Other lineage2.2.1 None
ERR9786525 Other lineage4.1;lineage4.8 None
ERR926165 Sensitive lineage4.9 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR926155 Sensitive lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR9786569 Other lineage4.8 None
ERR3797029 Other lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR400320 Sensitive lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR3797069 Other lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR3675492 Other La1.7;lineage4.9 None
ERR9896144 Other lineage3 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR736848 Other lineage4.9 None
ERR4816585 Other lineage2.2 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR4815604 Other None
ERR400345 Other lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR3675248 Other lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR7821123 Other lineage1.1.3.2 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR926163 Other lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR971389 Sensitive lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR3675449 Other M.canetti;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR6045892 Sensitive lineage4.9 None
SRR7496472 Other lineage4.9 None