Rv2477c - c.999G>C


Drug resistance types
12 Sensitive 7 RR-TB 21 HR-TB 17 MDR-TB 2 Pre-XDR-TB 2 XDR-TB 93 Other
lineage Counts
lineage Count
lineage4.1 1
lineage5.2 2
lineage4.9 42
lineage4.1.2.1 10
lineage4.7 2
14
lineage4.8 3
M.canetti;lineage2.2 2
La1.7;lineage4.9 5
lineage2.1;lineage4.9;lineage6.3 5
lineage2.1;lineage4.9 10
La3;lineage4.9 4
lineage2.2.1 7
lineage3 2
lineage4 3
La1;lineage4.9 1
La1.2.BCG;La1.8.1 1
lineage4.5 1
lineage6.3.1 2
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.6.3;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.6.2.2 3
lineage1.1.2;lineage4 1
lineage4.9;lineage6.3 3
lineage2.1;lineage6.3 2
La1.2 1
lineage2.2 1
La1.7.X-unk4;lineage4.9 1
La2;lineage4.9 1
La1.7;M.canetti;lineage4.9 1
lineage1.1.2 1
lineage1.1.3.2 1
lineage4.1;lineage4.8 2
lineage4.1.3 2
lineage4.8.1 1
lineage2.1 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage1.1.3.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
M.canetti;lineage4.9 1
La3;lineage2.1;lineage4.9 1
La2;lineage2.2 1
lineage2.2.2 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.1.1.3 1
lineage4.4.1.1 1
lineage4.3.2 1
spoligotype Counts
spoligotype Count
None 154
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9786440 Other lineage4.1 None
ERR9119500 MDR-TB lineage5.2 None
SRR12416840 MDR-TB lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
ERR926155 Other lineage4.9 None
SRR7496523 Other lineage4.7 None
SRR18213713 HR-TB None
ERR4816999 Other None
ERR6866807 RR-TB lineage4.9 None
ERR9786444 Sensitive lineage4.8 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3675385 Other La1.7;lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR400320 Sensitive lineage4.9 None
ERR926165 Other lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR1181020 Other lineage2.2.1 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR3283044 Other lineage4 None
ERR9119669 MDR-TB lineage4.9 None
SRR23961542 Other La1;lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR4811031 Other lineage4.5 None
ERR4820854 Other lineage4.1.2.1 None
SRR3675522 Other lineage4.9 None
ERR926163 Other lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9787223 Sensitive lineage6.3.1 None
ERR4812155 Other lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR1180137 RR-TB lineage2.2.1 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR6045892 Sensitive lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR3283018 HR-TB lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786645 Other lineage4.6.2.2 None
ERR926161 Sensitive lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675572 Other None
ERR11252664 Other lineage2.2.1 None
ERR4815604 Other None
SRR3675236 Other None
SRR25395701 Sensitive lineage4.1.2.1 None
ERR4817692 MDR-TB lineage1.1.2;lineage4 None
SRR3675275 Other lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR23961549 Other La1.2 None
SRR3675549 Other lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR926158 Sensitive lineage4.9 None
ERR4811030 Other lineage4.9 None
SRR3675248 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR400326 Other lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR1063862 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR8380944 Sensitive lineage1.1.2 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR7821123 Other lineage1.1.3.2 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
SRR3675221 Other lineage4.9 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR926164 Other lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
SRR3675457 Other lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4815752 Other lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR7131023 Other lineage4.1.2.1 None
ERR971389 Other lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR7496509 Other None
ERR9786671 Other None
ERR9786604 Other None
ERR9786843 Other None
ERR9117709 Other None
SRR6789626 Other None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR212001 HR-TB None
SRR7496517 Other None
ERR9787197 Other None
ERR3797029 Other lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR18910194 HR-TB lineage2.2.2 None
ERR4819932 Other lineage4.7 None
ERR4817735 Other lineage4.8 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR3675492 Other La1.7;lineage4.9 None
ERR9786569 Other lineage4.8 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9896144 Other lineage3 None
ERR926162 Sensitive lineage4.9 None
SRR3675214 Other lineage4.9 None
ERR736848 Other lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR9786627 Other lineage4.1.2.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR6046066 Other lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR400345 Other lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR3804169 HR-TB lineage4.1.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
SRR6785227 Other lineage2.2.1 None
ERR3804162 Sensitive lineage6.3.1 None
ERR1063846 HR-TB lineage4.9 None
SRR7496472 Other lineage4.9 None
SRR6046521 Other lineage4.4.1.1 None
ERR9117805 Other lineage4.3.2 None
SRR1181289 RR-TB lineage2.2.1 None
ERR3797064 Other La3;lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR3283042 HR-TB lineage4.9 None