Rv0006 - c.531G>T


Drug resistance types
61 Sensitive 10 RR-TB 68 HR-TB 23 MDR-TB 7 Pre-XDR-TB 0 XDR-TB 136 Other
lineage Counts
lineage Count
lineage4.9 115
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.7;lineage4.3.4.1 1
lineage4.6.2.2 3
lineage3 7
La1.7.1;La1.7.X-unk4 1
La1;lineage2;lineage4.9 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage4.3.2.1 2
lineage4.1.2.1 3
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
13
lineage4 3
lineage4.9;lineage6.3 8
La2;lineage4.9;lineage9 1
lineage4.2.1 1
lineage4.3.4.2.1 2
lineage4.8.1 1
M.canetti;lineage2.1;lineage6.3 1
lineage2.1;lineage4.9 12
M.canetti;lineage4.9 2
lineage1.1.1 1
La1.7;lineage4.9 9
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage4.3.2;lineage4.9 1
La1.7;M.canetti;lineage4.9 3
lineage2.2.1 17
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.2;lineage4.9 3
lineage2.1;lineage4.9;lineage6.3 9
La3;lineage2.1;lineage6.3 1
lineage2.2.1;lineage4.5 1
lineage2.1;lineage6.3 2
lineage4.1.2 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.9.1 1
La1.7 1
lineage4.9;lineage9 2
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.2.2 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La3;lineage4.9 3
lineage4.1.1.3 1
lineage4.5 3
M.canetti;lineage2.1;lineage4.9 2
lineage4.8 4
La3 2
lineage4.4.1.2 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage2.1 4
La3;lineage2.1;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage4.2 1
lineage4.8;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
M.canetti;lineage4.6.4;lineage4.9 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
M.canetti;lineage4.2;lineage4.9 2
La3;M.canetti;lineage2.2.1 1
lineage2.2 2
La1.6;La3;M.canetti;lineage4.2.2 1
La2;lineage4.9 1
lineage1.1.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage2.2.1;lineage6.3 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La1.7.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La1;lineage4.9 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.6.4;lineage4.9 1
lineage4.1.1.3;lineage4.9 1
La1.8.1 1
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage3.1.2.1;lineage3.1.2.2 1
La3;lineage2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage6.3.1 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.7 1
La3;lineage1.1.2 1
spoligotype Counts
spoligotype Count
None 305
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR1035157 Other lineage4.9 None
ERR181887 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
ERR502510 Sensitive lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
SRR6045219 HR-TB lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR124636 Sensitive lineage4.9 None
ERR4798504 RR-TB lineage3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR4820854 Other lineage4.1.2.1 None
SRR6044942 HR-TB lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
SRR3675236 Other None
ERR3273109 HR-TB lineage4 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR1181349 Sensitive lineage4 None
SRR7535086 Other None
SRR14802079 MDR-TB lineage4.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4800341 Other lineage3 None
ERR4799378 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR1023509 Other lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR5341298 Sensitive lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR9786843 Other None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR1184381 MDR-TB None
SRR3675221 Other lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR234659 Other None
SRR28044873 Pre-XDR-TB lineage3 None
SRR10808730 Other lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR1181289 Other lineage2.2.1 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR4796254 Sensitive lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323066 Sensitive lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR6824707 MDR-TB lineage2.2.1;lineage4.5 cn
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797069 Other lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR4188247 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR702405 Sensitive lineage4.9 None
ERR11466061 Sensitive lineage4.9.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR4830353 Other La1.7 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4798099 Other lineage4.9 None
SRR5341425 Other lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR5341384 HR-TB lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3283030 HR-TB lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR2446566 Other lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4797184 Sensitive lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR29096174 Sensitive La1.7;lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR28119753 Other lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR400326 Other lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
SRR6046245 Other lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR29017461 Other La3;lineage4.9 None
ERR751326 Other lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR176779 HR-TB lineage4.9 None
ERR3283032 Other lineage4.9 None
ERR11466044 Other lineage4.1.1.3 None
ERR2179645 Sensitive lineage4.5 cn
ERR990545 Other lineage3 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR3675387 Other lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR10380126 Sensitive lineage4.8 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR1172817 Other La3 None
SRR3675246 Other lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR28119827 Other La3;lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR9970979 Sensitive lineage4.8 None
ERR473332 Other lineage4.9 None
ERR176751 Other lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675488 Other La1.7;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR6832249 Sensitive lineage2.2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR3283018 HR-TB lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR6046485 Other lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR9787197 Other None
ERR181824 HR-TB lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR1723914 Sensitive lineage4.5 cn
SRR6045555 Other lineage4.9 None
ERR9786604 Other None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
SRR6045795 Sensitive lineage2.2.1 None
ERR4819809 HR-TB lineage4.6.2.2 None
ERR4831618 MDR-TB lineage2.1 None
SRR1196566 Other lineage4.9 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR323062 Sensitive lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR4407463 HR-TB None
SRR1180137 Other lineage2.2.1 None
SRR1173778 Other lineage4.9 None
ERR137286 Other lineage4.9 None
SRR10808668 Sensitive lineage2.2.1 None
ERR3797029 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR1173568 Sensitive lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR736872 HR-TB lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR502511 Sensitive lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4831620 MDR-TB lineage2.2.1 None
SRR1159378 Other lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR5341310 Other lineage1.1.2 None
SRR3675455 Sensitive lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
SRR3675279 Sensitive lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR4815604 Other None
ERR736856 Sensitive lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR5341366 Sensitive lineage4.9 None
SRR26399490 Sensitive lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR6511621 Sensitive lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR5341303 Sensitive lineage4.9 None
SRR1165699 Other lineage4.9 None
SRR1172728 RR-TB La3 None
SRR28119777 Other lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR702406 Other lineage2.1 None
ERR133825 HR-TB La1;lineage4.9 None
SRR6046594 Sensitive lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR926164 Other lineage4.9 None
ERR9117709 Other None
ERR3797086 Sensitive lineage4.9 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR6044835 Other lineage4.9 None
ERR323085 Sensitive lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1180413 Sensitive lineage4.9 None
ERR176740 Other lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR11465511 Other lineage4.3.4.2.1 None
ERR736834 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4816151 Sensitive lineage4.8 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR1180996 Sensitive lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR987722 MDR-TB None
SRR28119805 Other lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4814352 Other lineage2.2.1 None
SRR12142341 HR-TB lineage2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR176778 HR-TB lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR17832802 HR-TB lineage3 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR7236177 Other La1.8.1 None
SRR7535082 Sensitive lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR18213713 HR-TB None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR20969677 HR-TB La3;lineage2 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR1063896 Sensitive None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4817735 Other lineage4.8 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR3675501 Other La1.7;lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR4816585 Other lineage2.2 None
ERR323107 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR29097004 Other lineage3 None
SRR3675267 Other La1.7;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None