Rv0005 - c.1569C>T


Drug resistance types
20 Sensitive 2 RR-TB 24 HR-TB 8 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 30 Other
lineage Counts
lineage Count
lineage2.2.1 6
lineage4.9 38
lineage4.3.2.1 1
lineage4.9;lineage9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La1.7;lineage4.9 1
M.canetti;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage4.2 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2.1.1 3
2
lineage4.8;lineage4.9 2
lineage4.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage2.2 1
La1.6;La3;M.canetti;lineage4.2.2 1
La2;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La2;lineage4.9;lineage9 1
lineage4.6.2.2 2
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage3 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.9;lineage6.3 2
lineage2.1;lineage4.9;lineage6.3 2
lineage4 1
lineage4.3.4.2.1 1
lineage2.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
lineage2.1;lineage4.9 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.8 1
lineage4.3.4 1
lineage4.1.2 1
spoligotype Counts
spoligotype Count
None 85
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4831616 MDR-TB lineage2.2.1 None
ERR3797015 HR-TB lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR124636 Sensitive lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
ERR736834 Sensitive lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR5341299 HR-TB lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR29096117 Sensitive lineage2.2.1.1 None
ERR9787197 Other None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR9786440 Other lineage4.1 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR1180137 Other lineage2.2.1 None
ERR323066 Sensitive lineage4.9 None
SRR10040150 MDR-TB lineage2.2.1.1 None
SRR1183049 RR-TB lineage2.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR323039 HR-TB La2;lineage4.9 None
ERR702405 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR6511621 Sensitive lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR751326 Other lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR5341453 Other lineage4.9 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR4818831 Other lineage3 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR4024991 Other lineage4.8;lineage4.9 None
ERR4814896 Other lineage2.2.1.1 None
SRR5341387 Other lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323062 Sensitive lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
ERR137286 Other lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR1181020 Other lineage2.2.1 None
ERR4798099 Other lineage4.9 None
ERR1035157 Other lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR12416842 HR-TB lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR702406 Other lineage2.1 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR5341467 Other lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR9971112 Other lineage2.2.1 None
SRR3675585 Sensitive lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
SRR1181289 Other lineage2.2.1 None
ERR4796254 Sensitive lineage4.9 None
ERR9786569 Other lineage4.8 None
ERR736817 HR-TB lineage4.3.4 None
ERR1063896 Sensitive None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR502511 Sensitive lineage4.9 None
SRR1159378 Other lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR5341300 HR-TB lineage4.9 None