lineage | Count |
---|---|
lineage4.9 | 40 |
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
2 | |
lineage4.6.2.2 | 2 |
lineage2.1;lineage4.9;lineage6.3 | 2 |
lineage4.1.2 | 1 |
lineage4.3.2.1 | 1 |
lineage4 | 1 |
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
lineage4.9;lineage6.3 | 2 |
lineage3 | 1 |
lineage4.8 | 2 |
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
lineage2.2.1 | 6 |
lineage2.2.1.1 | 3 |
lineage4.1 | 1 |
lineage2.2 | 1 |
La1.6;La3;M.canetti;lineage4.2.2 | 1 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
lineage4.9;lineage9 | 1 |
La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
lineage2.1 | 1 |
lineage2.1;lineage4.9 | 1 |
lineage4.8;lineage4.9 | 2 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
lineage4.3.4 | 1 |
La2;lineage4.9 | 1 |
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
La1.7;lineage4.9 | 1 |
La2;lineage4.9;lineage9 | 1 |
lineage4.3.4.2.1 | 1 |
M.canetti;lineage4.9 | 1 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
M.canetti;lineage2.1;lineage6.3 | 1 |
M.canetti;lineage4.2 | 1 |
spoligotype | Count |
---|---|
None | 88 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR3675585 | Sensitive | lineage4.9 | None |
SRR5341299 | HR-TB | lineage4.9 | None |
SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None |
ERR9787197 | Other | None | |
ERR3801503 | Sensitive | lineage4.6.2.2 | None |
ERR4797474 | Sensitive | lineage4.9 | None |
ERR1063896 | Sensitive | None | |
ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None |
SRR9970980 | HR-TB | lineage4.1.2 | None |
ERR4798099 | Other | lineage4.9 | None |
SRR5341384 | HR-TB | lineage4.9 | None |
ERR502510 | Sensitive | lineage4.9 | None |
ERR3283030 | HR-TB | lineage4.9 | None |
SRR9970981 | RR-TB | lineage4.3.2.1 | None |
ERR3273109 | HR-TB | lineage4 | None |
ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
ERR212121 | HR-TB | lineage4.9;lineage6.3 | None |
SRR5341303 | Sensitive | lineage4.9 | None |
ERR4818831 | Other | lineage3 | None |
SRR9970979 | Sensitive | lineage4.8 | None |
ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None |
SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
SRR9971112 | Other | lineage2.2.1 | None |
ERR4814896 | Other | lineage2.2.1.1 | None |
SRR5341469 | HR-TB | lineage4.9 | None |
ERR4797264 | Sensitive | lineage4.9 | None |
SRR5341387 | Other | lineage4.9 | None |
ERR9786440 | Other | lineage4.1 | None |
SRR1180137 | Other | lineage2.2.1 | None |
ERR9786569 | Other | lineage4.8 | None |
ERR736872 | HR-TB | lineage4.9 | None |
SRR10040150 | MDR-TB | lineage2.2.1.1 | None |
SRR1183049 | RR-TB | lineage2.2 | None |
SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
SRR1159378 | Other | lineage4.9 | None |
ERR702405 | Sensitive | lineage4.9 | None |
SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None |
ERR1035157 | Other | lineage4.9 | None |
SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
SRR6046720 | HR-TB | lineage4.9;lineage9 | None |
ERR751326 | Other | lineage4.9 | None |
SRR12416842 | HR-TB | lineage4.9 | None |
ERR6866639 | Other | lineage4.9 | None |
ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
ERR702406 | Other | lineage2.1 | None |
ERR736867 | Other | lineage2.1;lineage4.9 | None |
SRR29096117 | Sensitive | lineage2.2.1.1 | None |
ERR323085 | Sensitive | lineage4.9 | None |
ERR4024991 | Other | lineage4.8;lineage4.9 | None |
ERR6866022 | Other | lineage4.8;lineage4.9 | None |
ERR736875 | HR-TB | lineage4.9 | None |
SRR1181289 | Other | lineage2.2.1 | None |
ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
ERR4796254 | Sensitive | lineage4.9 | None |
ERR502524 | HR-TB | lineage4.9;lineage6.3 | None |
SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
ERR323062 | Sensitive | lineage4.9 | None |
SRR1158918 | Sensitive | lineage4.9 | None |
ERR137286 | Other | lineage4.9 | None |
ERR323066 | Sensitive | lineage4.9 | None |
ERR3283040 | HR-TB | lineage4.9 | None |
ERR736817 | HR-TB | lineage4.3.4 | None |
ERR502511 | Sensitive | lineage4.9 | None |
ERR323039 | HR-TB | La2;lineage4.9 | None |
SRR1181020 | Other | lineage2.2.1 | None |
SRR5341300 | HR-TB | lineage4.9 | None |
ERR4831616 | MDR-TB | lineage2.2.1 | None |
ERR3797015 | HR-TB | lineage4.9 | None |
ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
ERR4797184 | Sensitive | lineage4.9 | None |
ERR124636 | Sensitive | lineage4.9 | None |
SRR5341461 | HR-TB | lineage4.9 | None |
SRR6511621 | Sensitive | lineage4.9 | None |
ERR1063862 | HR-TB | lineage4.9 | None |
ERR1023525 | HR-TB | La1.7;lineage4.9 | None |
ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None |
ERR245794 | HR-TB | lineage4.3.4.2.1 | None |
SRR5341453 | Other | lineage4.9 | None |
ERR9786711 | Sensitive | lineage4.6.2.2 | None |
ERR1035122 | Sensitive | lineage4.9 | None |
SRR3675449 | Other | M.canetti;lineage4.9 | None |
SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
SRR5341308 | Sensitive | lineage4.9 | None |
ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None |
SRR5341467 | Other | lineage4.9 | None |
ERR5311094 | HR-TB | lineage4.9 | None |
ERR736834 | Sensitive | lineage4.9 | None |
ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |