lineage | Count |
---|---|
lineage4.7 | 1 |
lineage1.1.3.2 | 1 |
La1;lineage4.9 | 2 |
La1;lineage4.1.2 | 1 |
lineage4.9 | 20 |
lineage4.1;lineage4.8 | 1 |
lineage1.1.3 | 5 |
lineage2.2 | 1 |
M.canetti;lineage4.9 | 1 |
lineage1.1.2 | 1 |
lineage2.2.1 | 3 |
lineage4.2;lineage4.6.3;lineage4.9 | 1 |
lineage4.8 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.6.3;lineage4.9 | 1 |
lineage4.1.1.2 | 1 |
lineage2.1;lineage4.1.4;lineage4.9 | 1 |
lineage4.4.1.2 | 1 |
2 | |
La3;lineage4.9 | 1 |
La1.7;lineage4.9;lineage6 | 1 |
lineage4.5 | 1 |
La1.7;lineage4.9 | 1 |
lineage4.9;lineage9 | 1 |
spoligotype | Count |
---|---|
None | 51 |
ID | Drug resistance | Lineage | Country iso2 | ERR11043063 | Sensitive | lineage4.7 | None | SRR28868888 | Other | lineage1.1.3.2 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | ERR4553622 | RR-TB | lineage1.1.3 | None | SRR29017686 | MDR-TB | lineage1.1.3 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR29096276 | Sensitive | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR17856650 | Sensitive | lineage1.1.2 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR1181289 | Other | lineage2.2.1 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR29126996 | Sensitive | lineage4.8 | None | SRR29017409 | MDR-TB | lineage1.1.3 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR4553628 | RR-TB | lineage1.1.3 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR29096425 | Sensitive | lineage4.9 | None | ERR212123 | Other | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR29097023 | Sensitive | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR29096107 | Sensitive | lineage4.9 | None | SRR6797842 | Sensitive | lineage1.1.3 | None | SRR29096873 | Sensitive | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR9786843 | Other | None | ERR212001 | HR-TB | None | SRR6045555 | Other | lineage4.9 | None | SRR29096203 | Sensitive | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR752229 | Other | lineage4.5 | None | ERR13264981 | Sensitive | La1.7;lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR161037 | Other | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR29231425 | Sensitive | lineage4.9 | None |
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