lineage | Count |
---|---|
72 | |
lineage4.3.4.1 | 2 |
lineage4 | 4 |
lineage4.9 | 7 |
lineage4.1.2.1 | 7 |
lineage4.1.3 | 2 |
La1 | 1 |
lineage2.2 | 4 |
lineage4.8;lineage4.1 | 2 |
lineage4.8 | 2 |
lineage4.6.2.2 | 3 |
lineage4.1.1 | 1 |
lineage6.3.1 | 1 |
lineage3 | 2 |
La3 | 1 |
lineage2.2.1 | 5 |
lineage3.1 | 2 |
lineage4.5 | 1 |
lineage1.1.1 | 1 |
lineage2 | 1 |
lineage7;lineage2.2.1.2 | 1 |
lineage3;lineage2.2.1 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.3.4 | 1 |
lineage4.3 | 1 |
La2 | 1 |
spoligotype | Count |
---|---|
None | 128 |
ID | Drug resistance | Lineage | Country iso2 | ERR3283027 | HR-TB | None | ERR323043 | HR-TB | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR1063883 | Sensitive | lineage4 | None | ERR3445504 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR387051 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4810741 | HR-TB | None | ERR4407463 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR6358979 | Other | None | ERR4811105 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6358991 | HR-TB | None | ERR736835 | HR-TB | None | ERR6359045 | HR-TB | None | ERR702406 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | ERR9786843 | Other | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786604 | Other | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9787197 | Other | None | ERR9787139 | Other | lineage6.3.1 | None | SRR1172234 | Other | None | ERR990545 | Other | lineage3 | None | SRR1169194 | Other | None | SRR1169249 | Other | La3 | None | SRR1167384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR1173363 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1173153 | HR-TB | None | SRR1173166 | Other | lineage4.9 | None | SRR1173384 | Other | lineage4 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173400 | Other | None | SRR1173629 | Other | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1173706 | Other | lineage4.9 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184294 | HR-TB | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184381 | MDR-TB | None | SRR1184388 | Other | None | SRR1184372 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR1196546 | HR-TB | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR17658565 | Other | lineage3 | None | SRR1196768 | MDR-TB | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | ERR11081258 | Other | lineage4.8 | None | SRR19303884 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR19304036 | HR-TB | None | SRR25827682 | Other | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR26159043 | Other | lineage4.9 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR176751 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675465 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675456 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR181744 | HR-TB | None | SRR3675236 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR176643 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212033 | HR-TB | None | ERR212034 | HR-TB | None | ERR212001 | HR-TB | None | ERR4817060 | RR-TB | None | ERR212121 | HR-TB | None | ERR212123 | Other | None | SRR3675571 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR234659 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6044790 | HR-TB | None | ERR1035138 | MDR-TB | None | SRR5341302 | HR-TB | None | SRR5341330 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046492 | Other | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046540 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR6789626 | Other | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | SRR8217918 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502532 | HR-TB | None | SRR7496517 | Other | None |
---|