Rv0006 - c.-563C>T
Drug resistance types
28 Sensitive
1 RR-TB
2 HR-TB
7 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
12 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 1 |
| lineage4.9 | 23 |
| lineage4.3.3 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.2.1 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| lineage5.1.4 | 1 |
| 1 | |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage7 | 1 |
| La1.7;lineage4.9 | 2 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage4.1.1.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage1.1.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 50 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675547 | Sensitive | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | ERR4811030 | Other | lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR3675387 | Other | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR12708416 | Sensitive | None | SRR1175496 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR3675477 | Sensitive | lineage4.9 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | SRR3675229 | Sensitive | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None |
|---|
