Rv0006 - c.-563C>T


Drug resistance types
28 Sensitive 1 RR-TB 2 HR-TB 7 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 12 Other
lineage Counts
lineage Count
lineage4.9 23
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.9;lineage7 1
La1.7;lineage4.9 2
lineage4.4.1.1 1
lineage4.1;lineage4.9 1
lineage1.1.1;lineage4 1
lineage4.1.1.3;lineage4.9 2
lineage2.2.1 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.2.1 1
lineage1;lineage4.9 1
lineage4.6.3;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.3.3 1
lineage3;lineage4.9 1
lineage5.1.4 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.1.2.1 1
lineage4.5 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.1.1.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La3;lineage2.1;lineage4.9;lineage6.3 1
1
spoligotype Counts
spoligotype Count
None 50
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR369161 Sensitive lineage4.9 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR5341323 Sensitive lineage4.9 None
ERR3445502 HR-TB lineage4.9;lineage7 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR4812155 Other lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
SRR3675547 Sensitive lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR2512770 Sensitive lineage4.2.1 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR1175508 Sensitive lineage4.9 None
ERR4811030 Other lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR3675387 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR12708419 Other lineage4.3.3 None
SRR5341396 Other lineage3;lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR1175496 Sensitive lineage4.9 None
ERR400320 Sensitive lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR3675455 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR5341345 Sensitive lineage4.9 None
ERR4811031 Other lineage4.5 None
SRR3675522 Other lineage4.9 None
SRR5818448 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR4814396 Sensitive lineage4.1.1.3 None
SRR12708372 Sensitive lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR3675514 Sensitive lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR12708416 Sensitive None