lineage | Count |
---|---|
lineage2.2.1 | 7 |
lineage4.2.1.1;lineage4.3.3 | 1 |
lineage4.9 | 53 |
lineage4.6.2.2 | 2 |
lineage4 | 5 |
lineage1.1.1;lineage4 | 1 |
2 | |
lineage2.1;lineage4.9;lineage7 | 1 |
lineage4.9;lineage7 | 2 |
lineage4.1.1.3 | 1 |
lineage3 | 3 |
lineage3;lineage4.9 | 1 |
lineage5.1.4 | 1 |
lineage4.1.1.3;lineage4.9 | 2 |
lineage4.2;lineage4.6.3;lineage4.9 | 1 |
lineage1;lineage4.9 | 1 |
lineage1.1.1 | 1 |
lineage4.5 | 1 |
lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
La2;lineage2.2 | 1 |
lineage2.2.1;lineage4 | 1 |
lineage4.8 | 1 |
lineage2.1;lineage4.9 | 1 |
lineage4.1.2.1 | 1 |
La2;lineage4.9 | 1 |
M.canetti;lineage4.9 | 1 |
lineage4.1;lineage4.8 | 2 |
lineage4.1;lineage4.9 | 1 |
lineage4.4.1.1 | 1 |
lineage4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 100 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR9971114 | Other | lineage2.2.1 | None |
ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None |
ERR387051 | Other | lineage4.9 | None |
SRR12708384 | Sensitive | lineage4.9 | None |
SRR3675522 | Other | lineage4.9 | None |
ERR067712 | Sensitive | lineage4.9 | None |
ERR6359066 | HR-TB | lineage4.9 | None |
SRR5341345 | Sensitive | lineage4.9 | None |
ERR1063855 | Other | lineage4.9 | None |
ERR400345 | Other | lineage4.9 | None |
ERR9119525 | MDR-TB | lineage4.6.2.2 | None |
SRR6044876 | Sensitive | lineage4.9 | None |
ERR400336 | Sensitive | lineage4.9 | None |
ERR4819877 | HR-TB | lineage4.9 | None |
ERR4816478 | HR-TB | lineage4 | None |
SRR3675387 | Other | lineage4.9 | None |
ERR473332 | Other | lineage4.9 | None |
ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None |
ERR4815815 | Sensitive | lineage4.9 | None |
ERR9786843 | Other | None | |
ERR2517475 | Other | lineage4 | None |
ERR4819422 | HR-TB | lineage4.9 | None |
SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None |
ERR6866807 | Other | lineage4.9 | None |
SRR1180137 | Other | lineage2.2.1 | None |
ERR4816762 | Sensitive | lineage4.9 | None |
SRR6045359 | Sensitive | lineage4.9 | None |
SRR1175496 | Sensitive | lineage4.9 | None |
ERR400320 | Sensitive | lineage4.9 | None |
SRR3675231 | MDR-TB | lineage4.9;lineage7 | None |
ERR3283030 | HR-TB | lineage4.9 | None |
ERR3797015 | HR-TB | lineage4.9 | None |
ERR4769474 | HR-TB | lineage4.9 | None |
SRR1175508 | Sensitive | lineage4.9 | None |
ERR4814396 | Sensitive | lineage4.1.1.3 | None |
SRR29231479 | RR-TB | lineage4.9 | None |
ERR4814639 | HR-TB | lineage4.9 | None |
SRR5341323 | Sensitive | lineage4.9 | None |
ERR2446382 | Other | lineage4 | None |
ERR4596902 | MDR-TB | lineage3 | None |
ERR990545 | Other | lineage3 | None |
SRR12708372 | Sensitive | lineage4.9 | None |
ERR4817731 | HR-TB | lineage4.9 | None |
SRR3675229 | Sensitive | lineage4.9 | None |
ERR4816656 | Other | lineage4.9 | None |
SRR6044819 | Sensitive | lineage4.9 | None |
SRR5341396 | Other | lineage3;lineage4.9 | None |
SRR2010299 | MDR-TB | lineage2.2.1 | None |
ERR2513283 | Sensitive | lineage5.1.4 | None |
ERR4797313 | Sensitive | lineage2.2.1 | None |
SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None |
SRR6046382 | Sensitive | lineage2.2.1 | None |
ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None |
SRR6046141 | Other | lineage4.9 | None |
ERR4797350 | Sensitive | lineage1;lineage4.9 | None |
ERR4819314 | Other | lineage1.1.1 | None |
ERR4819241 | Other | lineage4.9 | None |
ERR3283040 | HR-TB | lineage4.9 | None |
SRR6046611 | Sensitive | lineage4.9 | None |
ERR4811031 | Sensitive | lineage4.5 | None |
ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
ERR3275450 | Other | lineage4 | None |
SRR3675580 | Sensitive | lineage4.9 | None |
ERR1063839 | MDR-TB | La2;lineage2.2 | None |
ERR502943 | Sensitive | lineage2.2.1;lineage4 | None |
SRR5341296 | Sensitive | lineage4.9 | None |
ERR4820773 | HR-TB | lineage4.9 | None |
ERR4817667 | HR-TB | lineage4.8 | None |
SRR3675495 | Other | lineage2.1;lineage4.9 | None |
ERR4821686 | Sensitive | lineage4.1.2.1 | None |
SRR3675455 | Sensitive | lineage4.9 | None |
SRR1181020 | Other | lineage2.2.1 | None |
ERR176741 | Other | lineage4.9 | None |
SRR3675279 | Sensitive | lineage4.9 | None |
SRR3675473 | Sensitive | lineage4.9 | None |
ERR1063857 | MDR-TB | La2;lineage4.9 | None |
ERR736839 | HR-TB | M.canetti;lineage4.9 | None |
ERR4818561 | Sensitive | lineage4.9 | None |
ERR9786526 | Other | lineage4.1;lineage4.8 | None |
SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None |
SRR12708398 | Sensitive | lineage4.4.1.1 | None |
ERR4769521 | RR-TB | lineage4.9 | None |
ERR4872119 | MDR-TB | lineage4.6.2.2 | None |
ERR400326 | Other | lineage4.9 | None |
SRR6046245 | Other | lineage4.9 | None |
ERR4815441 | HR-TB | lineage4.9 | None |
SRR20970043 | MDR-TB | lineage2.2.1 | None |
SRR6046564 | Sensitive | lineage4.9 | None |
ERR4812155 | Other | lineage4.9 | None |
ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
ERR4819546 | HR-TB | lineage3 | None |
SRR5341437 | Sensitive | lineage4.9 | None |
SRR12708416 | Sensitive | None | |
SRR3675539 | HR-TB | lineage4.9;lineage7 | None |
ERR9786525 | Other | lineage4.1;lineage4.8 | None |
SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None |
ERR2512770 | Sensitive | lineage4.2.1 | None |
ERR4798823 | HR-TB | lineage4 | None |
ERR4818929 | HR-TB | lineage4.9 | None |
ERR4811030 | Sensitive | lineage4.9 | None |