Rv0667 - c.855A>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
41 Sensitive
2 RR-TB
21 HR-TB
7 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
28 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 53 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage4 | 5 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2.1 | 7 |
| lineage3 | 3 |
| lineage4.3 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage5.1.4 | 1 |
| 3 | |
| lineage4.9;lineage7 | 2 |
| lineage1.1.1 | 1 |
| lineage4.5 | 1 |
| lineage4.8 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.1.2.1 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.1 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La2;lineage2.2 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.2.1 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 100 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR387051 | Other | lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR3275450 | Other | lineage4 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | ERR176741 | Other | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR9786525 | Other | lineage4 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR990545 | Other | lineage3 | None | ERR2446382 | Other | lineage4 | None | ERR867542 | HR-TB | lineage4.3 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675387 | Other | lineage4.9 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR4819546 | HR-TB | lineage3 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR9786843 | Other | None | ERR2517475 | Other | lineage4 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR6046141 | Other | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819241 | Other | lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR3675279 | Sensitive | lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR9786526 | Other | lineage4.1 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR29231479 | RR-TB | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR12708416 | Sensitive | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR4798823 | HR-TB | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR12708384 | Sensitive | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR4812155 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None |
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