Rv3596c - c.1233G>C


Drug resistance types
124 Sensitive 5 RR-TB 42 HR-TB 11 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 64 Other
lineage Counts
lineage Count
lineage2.2.1 15
lineage4.9 147
lineage4 9
La2;lineage4.9;lineage9 1
lineage3 3
lineage4.2.1 2
lineage1.1.2 2
lineage2.2.1;lineage4.9 1
3
lineage1.1.1;lineage4 1
lineage4.8;lineage4.9 2
lineage4.1.1.3;lineage4.9 1
La1.7;lineage4.9;lineage6 1
lineage4.3.2.1 3
M.canetti;lineage4.2;lineage4.9 1
lineage6.1.1 2
lineage4.2.1.1;lineage4.3.3 1
La3;lineage4 1
lineage2.2.1;lineage4 1
lineage4.1.2 1
La3;M.canetti;lineage4.9 1
La3;lineage4.9 9
lineage4.3.4.2.1 1
lineage4.8.1 1
lineage4.8 1
lineage4.9;lineage9 1
lineage4.1.2.1 4
La3;lineage2.1;lineage4.9;lineage6.3 1
La1.2 1
lineage3;lineage4.9 1
La1.2.BCG 2
lineage5.1.4 1
lineage4.3.3 3
lineage4.3.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.9;lineage6.3 1
lineage4.2;lineage4.9 1
lineage4.1.1.1 1
lineage4.1;lineage4.9 2
lineage4.4.1.1.1 1
lineage4.2.2.2 1
lineage6.1.3 1
lineage4.1;lineage4.8 2
lineage4.4.1.1 1
lineage3.1.2.2 1
lineage4.1.1.3 1
lineage4.2;lineage4.8.1;lineage4.9 1
La1.7;lineage4.9 1
La1;lineage4.1.2 1
lineage2;lineage4 1
lineage1;lineage4.9 1
lineage4.5 1
La2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 247
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR12708392 Other lineage2.2.1 None
ERR485006 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR2446382 Other lineage4 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4596902 MDR-TB lineage3 None
ERR323037 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR4812155 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR1180399 Sensitive lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR373947 Other lineage4.9 None
ERR349266 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR9971112 Other lineage2.2.1 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR12708416 Sensitive None
ERR4796929 Sensitive lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR4797264 Sensitive lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
ERR736831 Other lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR926156 Sensitive lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
ERR926165 Sensitive lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
ERR4796254 Sensitive lineage4.9 None
ERR4815471 Sensitive lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
SRR1158918 Sensitive lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR4769444 HR-TB lineage4.9 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR29097026 Other lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR9787014 Other lineage6.1.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR3283028 Other La3;lineage4 None
ERR400320 Sensitive lineage4.9 None
SRR1062919 HR-TB lineage2.2.1 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR6046210 Other lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR5341296 Sensitive lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
ERR363490 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR323107 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
ERR108125 RR-TB lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
ERR926160 Sensitive lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR1063855 Other lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR4821655 HR-TB lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR4769474 HR-TB lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR6865513 Other lineage4.1.2.1 None
ERR3283011 Other La3;lineage4.9 None
ERR2514552 Sensitive lineage3 None
SRR6511621 Sensitive lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR400336 Sensitive lineage4.9 None
ERR926163 Other lineage4.9 None
ERR751326 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR363502 Other lineage4.9 None
SRR3675247 Other lineage4.9 None
ERR363447 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR23961549 Other La1.2 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR5341396 Other lineage3;lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR2513283 Sensitive lineage5.1.4 None
SRR12708419 Other lineage4.3.3 None
ERR6359070 Sensitive lineage4.9 None
ERR212033 Other lineage4.9 None
ERR2517475 Other lineage4 None
ERR4819462 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3675510 Sensitive La3;lineage4.9 None
SRR6045503 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR323062 Sensitive lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR926157 Sensitive lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
ERR137286 Other lineage4.9 None
SRR1049675 HR-TB lineage2.2.1 None
ERR4816113 Sensitive lineage4.1.1.1 None
ERR363453 Sensitive lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
SRR6044875 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR3275450 Other lineage4 None
ERR363498 Sensitive lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
SRR1159378 Other lineage4.9 None
SRR3675265 Other lineage4 None
ERR4188247 HR-TB lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR702405 Sensitive lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
ERR736848 Other lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR4799547 HR-TB lineage2.2.1 None
ERR369161 Sensitive lineage4.9 None
SRR5341425 Other lineage4.9 None
ERR4798099 Other lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR373945 Sensitive lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR6046897 Sensitive lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4797184 Sensitive lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR6359069 Sensitive lineage4.9 None
ERR4814396 Sensitive lineage4.1.1.3 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR7496471 Sensitive lineage4 None
SRR5341461 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR363499 Sensitive lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR363445 Other lineage4.9 None
ERR926164 Other lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
SRR6045050 Sensitive lineage4.3.2.1 None
SRR21677886 Sensitive lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR6045706 Sensitive lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
ERR3799304 Other lineage6.1.1 None
ERR736834 Sensitive lineage4.9 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR1915487 Other La1.2.BCG None
ERR349296 Sensitive lineage4.9 None
ERR9786843 Other None
ERR369159 Sensitive lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR4818536 Other lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR3675547 Sensitive lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR17832802 HR-TB lineage3 None
SRR6045795 Sensitive lineage2.2.1 None
SRR6046141 Other lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR323066 Sensitive lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR4769439 HR-TB lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR1175496 Sensitive lineage4.9 None
ERR1063896 Sensitive None
ERR369151 Other lineage4.9 None
ERR502511 Sensitive lineage4.9 None
SRR3675522 Other lineage4.9 None
SRR12708384 Sensitive lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR5341310 Other lineage1.1.2 None
ERR363506 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR349300 Sensitive lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
ERR4816964 Sensitive lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR400345 Other lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR124636 Sensitive lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR400326 Other lineage4.9 None
SRR6044876 Sensitive lineage4.9 None