Rv3596c - c.1233G>C
Drug resistance types
124 Sensitive
5 RR-TB
42 HR-TB
11 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
64 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 15 |
| lineage4.9 | 147 |
| lineage4 | 9 |
| La2;lineage4.9;lineage9 | 1 |
| lineage3 | 3 |
| lineage4.2.1 | 2 |
| lineage1.1.2 | 2 |
| lineage2.2.1;lineage4.9 | 1 |
| 3 | |
| lineage1.1.1;lineage4 | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.1.1.3;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.3.2.1 | 3 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage6.1.1 | 2 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| La3;lineage4 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.1.2 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| La3;lineage4.9 | 9 |
| lineage4.3.4.2.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.8 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage4.1.2.1 | 4 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.2 | 1 |
| lineage3;lineage4.9 | 1 |
| La1.2.BCG | 2 |
| lineage5.1.4 | 1 |
| lineage4.3.3 | 3 |
| lineage4.3.2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage6.1.3 | 1 |
| lineage4.1;lineage4.8 | 2 |
| lineage4.4.1.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| La1.7;lineage4.9 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage2;lineage4 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.5 | 1 |
| La2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 247 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12708392 | Other | lineage2.2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR2446382 | Other | lineage4 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR323037 | Other | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR12708416 | Sensitive | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | SRR1158918 | Sensitive | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR29097026 | Other | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR3283028 | Other | La3;lineage4 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR6046210 | Other | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR4821655 | HR-TB | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | SRR23961549 | Other | La1.2 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR6044875 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR3275450 | Other | lineage4 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR736848 | Other | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR373945 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR1915487 | Other | La1.2.BCG | None | ERR349296 | Sensitive | lineage4.9 | None | ERR9786843 | Other | None | ERR369159 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR3675547 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR17832802 | HR-TB | lineage3 | None | SRR6045795 | Sensitive | lineage2.2.1 | None | SRR6046141 | Other | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR369151 | Other | lineage4.9 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR12708384 | Sensitive | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR400326 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None |
|---|
