Rv0667 - c.609C>T


Drug resistance types
74 Sensitive 12 RR-TB 91 HR-TB 18 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 117 Other
lineage Counts
lineage Count
La3;lineage2.1;lineage4.9;lineage6.3 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage4 8
lineage4.9 174
lineage4.1;lineage4.9 2
La3;lineage4.9 10
lineage2.2.1 23
lineage4.8;lineage4.9 2
lineage2.2 2
3
lineage1.1.2 3
lineage4.6.1.1 2
lineage4.1.1.3 4
lineage4.2.1.1;lineage4.3.3 1
lineage4.1.2.1 5
lineage4.3.4.2.1 5
lineage2.2.1;lineage4 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.3.4.2 1
lineage4.3.3 2
lineage1.2.1.1 1
La1.7;lineage4.9;lineage7 3
lineage4.3.4.1 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.2;lineage4.9 1
lineage4.4.1.2 1
lineage2.2.1.1 5
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La3;lineage4 1
lineage4.8 2
lineage4.3.4 1
lineage2.2.2 2
lineage4.9.1 1
lineage4.1.2 1
lineage4.2.1 2
lineage2.2;lineage4.9 1
La1;lineage2;lineage4.9 1
lineage4.3.2.1 3
La1.8.1 2
lineage1;lineage4.9 1
La3;lineage4.3.4 1
lineage4.5 1
M.canetti;lineage1 1
M.canetti;lineage4.2;lineage4.9 1
lineage1.2.1.2 1
lineage4.3.1;lineage4.9;lineage6 1
La1;lineage4.1.2 1
lineage4.9;lineage9 1
lineage1.1.1;lineage4 1
lineage3 1
lineage5.1.4 1
lineage1.1.3.1 1
La1.7;lineage4.9;lineage6 1
lineage3.1.3 1
La3;lineage2.1;lineage4.9 1
lineage4.8.1 1
lineage6.1.3 1
lineage4.9;lineage6.1.3 1
La1.2;La1.8.1 1
La1.7;lineage3.1;lineage4 1
La1.7;lineage4.9 2
lineage4.4.1.1 1
lineage1.1.1.1 1
lineage5.1.2 1
lineage4.6.2.2 1
spoligotype Counts
spoligotype Count
None 316
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR2517475 Other lineage4 None
ERR363500 Other lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
ERR736834 HR-TB lineage4.9 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
SRR6046594 Other lineage4.9 None
ERR926155 Other lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
SRR6044780 Sensitive lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR161037 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR363446 Other lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
ERR1063896 HR-TB None
ERR11252612 Other La3;lineage4.9 None
SRR12708416 Sensitive None
ERR245675 Sensitive lineage1.1.2 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR369162 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR4797474 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR5341330 Other lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR369158 Other lineage4.9 None
SRR3675265 Other lineage4 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR9786592 Other lineage4.3.4.2 None
ERR4188247 HR-TB lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR926165 Other lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
ERR926156 Other lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR4814734 Other lineage1.2.1.1 None
ERR926162 Sensitive lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
ERR926157 Other lineage4.9 None
SRR6046245 Other lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
SRR6045555 Other lineage4.9 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR323115 Sensitive lineage4.9 None
ERR369161 Sensitive lineage4.9 None
ERR373946 Other lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
SRR14801749 HR-TB lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR323066 HR-TB lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
ERR926158 Sensitive lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675580 Sensitive lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR1180996 Other lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
ERR363498 Other lineage4.9 None
ERR323107 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
SRR5341453 Other lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR363502 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR4797313 Sensitive lineage2.2.1 None
SRR3675246 Other lineage4.9 None
ERR363453 Other lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
ERR473332 Other lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR12708392 Other lineage2.2.1 None
SRR6044819 Sensitive lineage4.9 None
ERR11465511 Other lineage4.3.4.2.1 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR4819422 HR-TB lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR4796929 Sensitive lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR349266 Other lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR502511 HR-TB lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR349300 Other lineage4.9 None
ERR9786444 Sensitive lineage4.8 None
ERR137286 Other lineage4.9 None
SRR5341373 Other lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR779852 HR-TB lineage4.9 None
ERR373945 Other lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR736817 HR-TB lineage4.3.4 None
SRR6045010 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR4798099 HR-TB lineage4.9 None
ERR3275450 Other lineage4 None
ERR363499 Other lineage4.9 None
ERR369151 Other lineage4.9 None
ERR702405 HR-TB lineage4.9 None
ERR212033 Other lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR245758 Other lineage4.9.1 None
ERR3283055 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4820773 HR-TB lineage4.9 None
ERR363474 Sensitive lineage4.9 None
SRR10315466 RR-TB lineage2.2.1 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR4816466 HR-TB lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR3675473 Sensitive lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR736848 Other lineage4.9 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR2512770 Sensitive lineage4.2.1 None
ERR369163 Other lineage4.9 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR5341384 HR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
ERR349330 Sensitive lineage4.9 None
SRR7236177 Other La1.8.1 None
SRR11662694 Other lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR4811031 Other lineage4.5 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR15014655 Other M.canetti;lineage1 None
ERR349264 Other lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
ERR323062 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
SRR3675585 HR-TB lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR926163 Other lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR751326 Other lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR4815471 HR-TB lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR6045706 Other lineage4.9 None
SRR12006550 Other lineage1.2.1.2 None
ERR4796254 Other lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4819877 HR-TB lineage4.9 None
ERR176751 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
SRR3675387 Other lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
ERR4814396 Sensitive lineage4.1.1.3 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR1165628 Other La3;lineage4.9 None
SRR3675547 Sensitive lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4797184 HR-TB lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
SRR1158918 Other lineage4.9 None
ERR369156 Sensitive lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR5341467 Other lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR1167271 MDR-TB lineage4.1.1.3 None
ERR502510 HR-TB lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR2446382 Other lineage4 None
ERR6865513 Other lineage4.1.2.1 None
SRR1183144 RR-TB lineage2.2.1 None
ERR4819241 Other lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR5341299 HR-TB lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR363479 Other lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
SRR6045503 Other lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR971389 Other lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR212001 HR-TB None
SRR6045795 Other lineage2.2.1 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR6358979 HR-TB lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
ERR363449 Other lineage4.9 None
ERR2514327 HR-TB lineage4.8 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
ERR2513724 Sensitive lineage4.3.2.1 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR5341298 Other lineage4.9 None
SRR10808668 Other lineage2.2.1 None
ERR363421 Other lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR1159378 Other lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR349296 Sensitive lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR20969708 HR-TB lineage2.2 None
ERR6866639 HR-TB lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR6866410 HR-TB lineage4.9 None
SRR7535082 Other lineage4.9 None
ERR363506 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR11465628 Sensitive lineage4.3.4.2.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR5341300 HR-TB lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR9971150 RR-TB lineage4.8.1 None
SRR5341345 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR349265 Other lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR5341310 Other lineage1.1.2 None
SRR7240033 Other La1.2;La1.8.1 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR6045219 HR-TB lineage4.9 None
ERR124636 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR1175052 HR-TB lineage4.9 None
ERR926160 Other lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR400336 Sensitive lineage4.9 None
ERR4811030 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR349299 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR400326 Other lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR3675235 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR4816904 Sensitive lineage4.1.2.1 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
SRR1172885 HR-TB lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR12708384 Sensitive lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR1181091 Other lineage2.2.1.1 None
ERR363490 Other lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR926164 Other lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR4178226 Sensitive lineage4 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR5341455 Sensitive lineage4.9 None
ERR363447 Other lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR22251803 Sensitive lineage1.1.1.1 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR373947 Other lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR400538 RR-TB lineage5.1.2 None
ERR4819809 HR-TB lineage4.6.2.2 None