Rv3596c - c.1161C>T
Drug resistance types
47 Sensitive
1 RR-TB
17 HR-TB
5 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 52 |
| lineage4 | 5 |
| lineage2.2.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.1.2.1 | 2 |
| lineage1.2.2.2 | 1 |
| lineage2.2.1 | 8 |
| 1 | |
| lineage3;lineage4.9 | 1 |
| lineage4.3.3 | 3 |
| lineage4.3.2.1 | 2 |
| lineage1;lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage6.1.3 | 1 |
| lineage4.8 | 1 |
| lineage3 | 1 |
| M.canetti;lineage4.9 | 3 |
| lineage1.1.1;lineage4 | 1 |
| lineage4.2.1 | 1 |
| lineage4.1;lineage4.9 | 2 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.4.1.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage5.1.4 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 96 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675455 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR400326 | Other | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR12708416 | Sensitive | None | SRR5341396 | Other | lineage3;lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR3675477 | Sensitive | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR3275450 | Other | lineage4 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR751326 | Other | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR369162 | Other | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR369158 | Other | lineage4.9 | None | ERR502511 | Sensitive | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR502510 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR400345 | Other | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR2446382 | Other | lineage4 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR349264 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR12708384 | Sensitive | lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR4178309 | Other | lineage4.1.2.1 | None |
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