Rv0006 - c.1545C>T
Drug resistance types
31 Sensitive
0 RR-TB
7 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
11 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.3 | 2 |
| lineage4.9 | 25 |
| lineage2.2.1 | 3 |
| lineage4.1.2.1 | 4 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.5 | 1 |
| lineage4.1.2 | 1 |
| lineage4.1.1.2 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.4.2 | 1 |
| 2 | |
| lineage1.1.1;lineage4 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage4.4.1.1 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage5.1.4 | 1 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 52 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR4814396 | Sensitive | lineage4.1.1.3 | None |
| SRR5341323 | Sensitive | lineage4.9 | None |
| SRR20970043 | MDR-TB | lineage2.2.1 | None |
| SRR21736379 | Sensitive | lineage4.1.2.1 | None |
| SRR3675541 | Sensitive | lineage4.9 | None |
| SRR3675387 | Other | lineage4.9 | None |
| SRR8217918 | HR-TB | lineage4.9 | None |
| SRR3675229 | Sensitive | lineage4.9 | None |
| ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
| SRR3675247 | Other | lineage4.9 | None |
| SRR6044819 | Sensitive | lineage4.9 | None |
| SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None |
| ERR11068526 | Sensitive | lineage4.1.2.1 | None |
| ERR4811031 | Sensitive | lineage4.5 | None |
| ERR400320 | Sensitive | lineage4.9 | None |
| SRR9970980 | HR-TB | lineage4.1.2 | None |
| SRR3675279 | Sensitive | lineage4.9 | None |
| SRR3675514 | Sensitive | lineage4.9 | None |
| ERR736856 | Sensitive | lineage4.9 | None |
| SRR14801749 | HR-TB | lineage4.9 | None |
| ERR4818252 | Sensitive | lineage4.1.1.2 | None |
| SRR1175508 | Sensitive | lineage4.9 | None |
| SRR10808805 | Other | La1;lineage4.9 | None |
| DRR188519 | Other | lineage4.4.2 | None |
| SRR6046564 | Sensitive | lineage4.9 | None |
| SRR12708416 | Sensitive | None | |
| ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None |
| SRR9971114 | Other | lineage2.2.1 | None |
| SRR12142339 | HR-TB | lineage2.2.1 | None |
| SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
| SRR21690156 | Sensitive | lineage4.1.2.1 | None |
| SRR5535933 | Other | lineage4.9 | None |
| SRR3675522 | Other | lineage4.9 | None |
| SRR6045191 | Sensitive | lineage4.9 | None |
| SRR5341296 | Sensitive | lineage4.9 | None |
| SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
| ERR4821686 | Sensitive | lineage4.1.2.1 | None |
| SRR12708371 | HR-TB | lineage4.1.1.3 | None |
| SRR3675473 | Sensitive | lineage4.9 | None |
| SRR12708398 | Sensitive | lineage4.4.1.1 | None |
| SRR9970978 | Sensitive | La1;lineage4.1.2 | None |
| ERR4796929 | Sensitive | lineage4.9 | None |
| ERR2513283 | Sensitive | lineage5.1.4 | None |
| SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None |
| ERR4797350 | Sensitive | lineage1;lineage4.9 | None |
| ERR4796577 | HR-TB | None | |
| ERR4811030 | Sensitive | lineage4.9 | None |
| ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
| SRR3675455 | Sensitive | lineage4.9 | None |
| SRR5341330 | Other | lineage4.9 | None |
| SRR10809074 | Sensitive | lineage4.9 | None |
| ERR400345 | Other | lineage4.9 | None |
