Rv3596c - c.1164C>G


Drug resistance types
90 Sensitive 1 RR-TB 38 HR-TB 10 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 50 Other
lineage Counts
lineage Count
lineage4.9 108
La1.8.1 3
lineage4.6.2.2 1
lineage4 7
lineage4.6.1.2 3
lineage4.1.2.1 5
lineage2.2.1 17
lineage4.1.1.1 1
lineage4.2.1.1;lineage4.3.3 1
lineage4.3.4.2.1 3
lineage2.2.1;lineage4 1
lineage4.1.1.3 2
lineage4.8 2
lineage3 3
lineage4.3.2.1 5
La3;lineage4.3.4 1
lineage2.2.2 1
M.canetti;lineage1 1
lineage4.4.2 1
lineage4.9.1 1
lineage3;lineage4.9 1
lineage5.1.4 1
lineage4.2.1 1
3
lineage4.1;lineage4.9 2
La1.7.1 1
lineage4.1.2 1
lineage1.1.2 1
lineage4.3.3 3
lineage4.8;lineage4.9 2
lineage1;lineage4.9 1
La3;lineage4.9 1
La1.7;lineage4.9;lineage6 1
lineage4.5 2
M.canetti;lineage4.9;lineage9 1
lineage6.1.3 1
lineage4.4.1.1 1
lineage1.2.2.2 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage1.1.1;lineage4 1
spoligotype Counts
spoligotype Count
None 194
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR19295647 Sensitive lineage4.9 None
SRR11462861 Other La1.8.1 None
SRR3675477 Sensitive lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR6045832 Other lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR4798823 HR-TB lineage4 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1158918 Sensitive lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR369162 Other lineage4.9 None
SRR1049675 HR-TB lineage2.2.1 None
ERR4816113 Sensitive lineage4.1.1.1 None
ERR363453 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR10315558 Sensitive lineage2.2.1 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
ERR3275450 Other lineage4 None
ERR369151 Other lineage4.9 None
ERR363498 Sensitive lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR1159378 Other lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR12708413 HR-TB lineage4.1.1.3 None
ERR4817667 HR-TB lineage4.8 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR17658565 Pre-XDR-TB lineage3 None
SRR12708418 HR-TB lineage2.2.1 None
ERR4799547 HR-TB lineage2.2.1 None
ERR363421 Sensitive lineage4.9 None
ERR369161 Sensitive lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR5341384 HR-TB lineage4.9 None
ERR349265 Other lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR3797019 Other La1.8.1 None
SRR11662694 Other lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR124636 Sensitive lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR6359069 Sensitive lineage4.9 None
ERR4814396 Sensitive lineage4.1.1.3 None
ERR6865513 Other lineage4.1.2.1 None
SRR15014655 Other M.canetti;lineage1 None
SRR12708392 Other lineage2.2.1 None
ERR2514552 Sensitive lineage3 None
SRR20969542 Other lineage4.4.2 None
SRR6511621 Sensitive lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR400336 Sensitive lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR2446382 Other lineage4 None
ERR751326 Other lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR3675541 Sensitive lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR11466062 Sensitive lineage4.9.1 None
SRR6045706 Sensitive lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR736834 Sensitive lineage4.9 None
SRR5341396 Other lineage3;lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR4816151 Sensitive lineage4.8 None
ERR2513283 Sensitive lineage5.1.4 None
SRR5341469 HR-TB lineage4.9 None
ERR349264 Sensitive lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
ERR349330 Sensitive lineage4.9 None
SRR1181256 Other lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
ERR4796254 Sensitive lineage4.9 None
ERR4815471 Sensitive lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
ERR4796577 HR-TB None
ERR137286 Other lineage4.9 None
ERR323066 Sensitive lineage4.9 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR10808668 Sensitive lineage2.2.1 None
SRR6046611 Sensitive lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR4818646 Sensitive lineage4.1.2.1 None
SRR1181403 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR1063896 Sensitive None
ERR3797080 Sensitive lineage4.9 None
ERR369158 Other lineage4.9 None
ERR502511 Sensitive lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR5341455 Sensitive lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
SRR5341310 Other lineage1.1.2 None
ERR702405 Sensitive lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR5341300 HR-TB lineage4.9 None
ERR4798099 Other lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR3675235 Sensitive lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR4816964 Sensitive lineage4.9 None
ERR502510 Sensitive lineage4.9 None
SRR1062880 MDR-TB lineage4.6.1.2 None
ERR400345 Other lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR6046245 Other lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR6046564 Sensitive lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR5341453 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
SRR6045050 Sensitive lineage4.3.2.1 None
SRR5341308 Sensitive lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
ERR373947 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
ERR349266 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR9971112 Other lineage2.2.1 None
SRR12708416 Sensitive None
SRR2010299 MDR-TB lineage2.2.1 None
ERR349296 Sensitive lineage4.9 None
ERR473334 HR-TB lineage4.9 None
SRR12708419 Other lineage4.3.3 None
ERR6359070 Sensitive lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR16156804 Sensitive lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR7236177 Other La1.8.1 None
ERR181744 HR-TB La3;lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR3283040 HR-TB lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
SRR12708414 HR-TB lineage2.2.1 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR12708409 HR-TB lineage4.3.3 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR3675580 Sensitive lineage4.9 None
SRR3675522 Other lineage4.9 None
SRR12708384 Sensitive lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR363506 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR3283030 HR-TB lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR4816548 HR-TB lineage4.5 None
ERR4797184 Sensitive lineage4.9 None
ERR161037 Other lineage4.9 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR3675209 Sensitive lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR400326 Other lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR6045371 Other lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR6866639 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR363502 Other lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341298 Sensitive lineage4.9 None
SRR1238558 Other lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR4797264 Sensitive lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
ERR3797081 Sensitive lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR2517475 Other lineage4 None
ERR363446 Sensitive lineage4.9 None