EBG00000313339 - n.74T>A


Drug resistance types
98 Sensitive 13 RR-TB 26 HR-TB 23 MDR-TB 8 Pre-XDR-TB 0 XDR-TB 81 Other
lineage Counts
lineage Count
lineage4.9 146
lineage2.2.1 20
lineage2.2.1;lineage4 2
lineage4.1.2.1 3
lineage4.3.4.2.1 2
La3;lineage4.9 7
lineage4.3.2.1 4
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.1;lineage4.9 2
lineage4.1.1.3 3
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.8 4
2
lineage4.1.1.3;lineage4.9 2
lineage2.1;lineage4.9;lineage7 1
lineage4.3.3 4
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
lineage4.3.4.2 1
lineage3.1.2.1 1
lineage4.1.2 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 1
lineage4 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage3 2
lineage2.2.1;lineage4.9 2
La1.3 3
M.canetti;lineage4.2 1
lineage4.1.2.1;lineage4.4.1 1
lineage6.1.3 1
lineage2.2.1.2 1
lineage4.1.1.1 2
lineage4.8.1 1
lineage4.2.1 1
lineage2.1;lineage4.9 1
lineage4.5 1
lineage2.2.2 1
lineage1.2.2.2 1
La1;lineage4.9 1
lineage3.1.1;lineage4.9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.4.1.1 2
lineage2;lineage4.9 1
lineage4.1.2.1;lineage4.4.1.1 1
lineage4.3.3;lineage4.9 1
lineage1.1.1 1
lineage5.1.4 1
La3;lineage4 1
lineage4.2.1.1;lineage4.3.3 1
lineage4.9;lineage7 1
lineage4.4.1.1.1 2
lineage2.2.1.1 1
La1.6;La3;M.canetti;lineage4.2.2 1
lineage4.2.2.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 249
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR736837 Pre-XDR-TB lineage4.9 None
ERR349265 Other lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
SRR1181351 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR6046897 Sensitive lineage4.9 None
SRR1140736 Other lineage4.1.2.1 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR11662694 Other lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR1175508 Sensitive lineage4.9 None
ERR926160 Other lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR4811030 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR1181328 Other lineage2.2.1 None
ERR349299 Other lineage4.9 None
ERR400326 Other lineage4.9 None
ERR349264 Other lineage4.9 None
ERR867570 RR-TB lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR363498 Other lineage4.9 None
ERR926163 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR6045706 Other lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR8692812 Sensitive lineage4.9 None
ERR736831 Other lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR3797047 MDR-TB lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
ERR970413 MDR-TB lineage2.2.1 None
ERR363500 Other lineage4.9 None
SRR1238558 Other lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
ERR473303 Sensitive lineage4.9 None
ERR926155 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
ERR363479 Other lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR369159 Other lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR363446 Other lineage4.9 None
ERR2515230 Sensitive lineage4.8 None
SRR12708416 Sensitive None
SRR1180406 Sensitive lineage4.9 None
ERR369162 Other lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR11342649 MDR-TB lineage4.3.3 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR11342673 RR-TB lineage4.3.4.2 None
SRR1180345 Other lineage4.9 None
SRR1175496 Sensitive lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
ERR369158 Other lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
ERR4816964 HR-TB lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR11342669 Other lineage4.8 None
ERR4815022 Other lineage3.1.2.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR363474 Sensitive lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
SRR6832787 Other lineage2.2.1 None
ERR387051 RR-TB lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
ERR216965 Sensitive lineage4.9 None
ERR369161 Sensitive lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR400345 Other lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR349330 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
ERR3797063 Other La3;lineage4.9 None
SRR6855695 Sensitive lineage4.8 None
SRR3675582 Other lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
ERR485006 HR-TB lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
ERR323037 Other lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
SRR12708409 HR-TB lineage4.3.3 None
SRR5341296 Sensitive lineage4.9 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR3797064 Other La3;lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR4769444 HR-TB lineage4.9 None
ERR363502 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR4829238 Sensitive lineage3 None
SRR1180391 Sensitive lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
ERR373947 Other lineage4.9 None
ERR4819383 RR-TB lineage4.9 None
ERR4769555 Sensitive La1.3 None
SRR1180413 Sensitive lineage4.9 None
ERR473323 HR-TB lineage4.9 None
SRR12708419 Other lineage4.3.3 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR3675209 Sensitive lineage4.9 None
ERR349266 Other lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR971389 Other lineage4.9 None
ERR363456 Sensitive lineage4.9 None
SRR8692887 Other None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
SRR1049675 HR-TB lineage2.2.1 None
SRR3675502 Sensitive lineage4.9 None
SRR1181368 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR373945 Other lineage4.9 None
ERR2513724 Sensitive lineage4.3.2.1 None
ERR369157 Sensitive lineage4.9 None
ERR363499 Other lineage4.9 None
ERR9787336 RR-TB lineage6.1.3 None
ERR369151 Other lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR4188247 HR-TB lineage4.9 None
ERR926165 Other lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR3283031 Other La3;lineage4.9 None
ERR363506 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR176741 Other lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR369163 Other lineage4.9 None
SRR3675210 Sensitive lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
SRR5341345 Sensitive lineage4.9 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
ERR4769439 HR-TB lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR373946 Other lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR4769514 Other La1.3 None
SRR3675548 Sensitive lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4811031 Other lineage4.5 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR28119823 Sensitive lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR11972300 MDR-TB lineage2.2.1 None
SRR12708411 HR-TB lineage1.2.2.2 None
ERR4769550 Sensitive La1;lineage4.9 None
SRR3675318 Other lineage4.9 None
SRR1173687 Pre-XDR-TB lineage2.2.1 None
ERR171142 Other lineage3.1.1;lineage4.9 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR1181214 Other lineage4.9 None
ERR4815471 HR-TB lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
ERR926159 Sensitive lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
SRR11342698 RR-TB lineage4.4.1.1 None
ERR4769552 Sensitive La1.3 None
SRR1172717 Sensitive lineage4.9 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
ERR3283014 Other La3;lineage4.9 None
ERR4814396 Sensitive lineage4.1.1.3 None
ERR363490 Other lineage4.9 None
ERR926164 Other lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
ERR363453 Other lineage4.9 None
SRR21658550 Other lineage1.1.1 None
SRR1180399 Sensitive lineage4.9 None
ERR363447 Other lineage4.9 None
SRR12708392 Other lineage2.2.1 None
ERR369156 Sensitive lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
ERR502470 RR-TB lineage4.9 None
ERR1023509 MDR-TB lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
SRR3675542 Other lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
SRR6045503 Other lineage4.9 None
ERR970445 MDR-TB lineage2.2.1 None
SRR1180410 Sensitive lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR349300 Other lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
ERR363449 Other lineage4.9 None
SRR1181403 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR363421 Other lineage4.9 None
ERR970441 RR-TB lineage2.2.1.1 None
ERR400320 Sensitive lineage4.9 None
ERR9786076 Other lineage3 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR6832249 Sensitive lineage2.2.1 None
ERR349296 Sensitive lineage4.9 None
ERR926172 Sensitive lineage4.9 None
SRR6045832 Other lineage4.9 None
SRR6046141 Other lineage4.9 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR926156 Other lineage4.9 None
SRR1238559 Other lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
ERR4799547 HR-TB lineage2.2.1 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR1175487 Sensitive lineage4.9 None