Rv0668 - c.3654C>T
Drug resistance types
89 Sensitive
4 RR-TB
65 HR-TB
11 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
60 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 9 |
| lineage2.2.1;lineage4 | 2 |
| lineage4.3.4.2 | 2 |
| lineage4.9 | 141 |
| La1.7.1 | 1 |
| lineage4.1.2 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage1.1.2 | 3 |
| La3;lineage4.9 | 6 |
| lineage4 | 6 |
| La1.7;lineage4.9 | 4 |
| lineage4.8 | 3 |
| lineage2;lineage4.9 | 1 |
| La1;lineage4.9 | 3 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.6.2.2 | 1 |
| lineage6.1.2 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage1.1.3.1 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.4.1.1.1 | 2 |
| La2;lineage2.2 | 1 |
| La1.8.1 | 2 |
| lineage4.2.1 | 1 |
| La2;lineage4.9 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4.5 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1.2.1 | 4 |
| lineage4.4.1.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.3.4.1 | 2 |
| lineage3;lineage4.9 | 1 |
| La1.2.BCG | 1 |
| 1 | |
| lineage2.2 | 1 |
| lineage3 | 3 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage4.3.3 | 2 |
| M.canetti;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage2.2.2 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage5.1.4 | 1 |
| lineage4.1.1.3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 237 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR9786592 | Other | lineage4.3.4.2 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR6046141 | Other | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | ERR067699 | HR-TB | La1;lineage2;lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR3675522 | Other | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | ERR4815471 | HR-TB | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR12708384 | Sensitive | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR3675246 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR926155 | Other | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR4797474 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR4818252 | HR-TB | lineage4.1.1.2 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR10808668 | Other | lineage2.2.1 | None | ERR2693252 | HR-TB | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR926165 | Other | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR926156 | Other | lineage4.9 | None | ERR3797060 | Other | La1.8.1 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4821655 | HR-TB | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR3797063 | Other | La3;lineage4.9 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR323107 | HR-TB | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR10809074 | HR-TB | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR473332 | Other | lineage4.9 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | SRR6044835 | Other | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | ERR502510 | HR-TB | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | ERR473334 | HR-TB | lineage4.9 | None | ERR161037 | HR-TB | lineage4.9 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | SRR12708416 | Sensitive | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR4816964 | HR-TB | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR9786076 | Other | lineage3 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR6866410 | HR-TB | lineage4.9 | None | SRR7535082 | Other | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | SRR6046245 | Other | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR9119669 | MDR-TB | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR926160 | Other | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR4796254 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR3675387 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR11488822 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR6045359 | HR-TB | lineage4.9 | None | SRR28351347 | Other | lineage3 | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | ERR6358979 | HR-TB | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR3797029 | Other | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR779852 | HR-TB | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1175496 | Sensitive | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR3275450 | Other | lineage4 | None |
|---|
