EBG00000313339 - n.99G>T


Drug resistance types
144 Sensitive 13 RR-TB 43 HR-TB 17 MDR-TB 11 Pre-XDR-TB 0 XDR-TB 86 Other
lineage Counts
lineage Count
lineage2.2.1 24
18
lineage4.9 110
lineage4 70
lineage4.5 1
La1.2 1
lineage4.1.2.1 11
lineage3 10
lineage6 1
lineage4.8 8
La1.8.1 2
lineage4.4.1.1;lineage4.1.2.1 1
lineage4.4.1.1.1 2
La1.6 1
lineage4.9;lineage2.2 1
lineage2.2 2
lineage2 1
lineage4.2.2.1 1
La2 1
lineage3.1.3 1
lineage4.1 1
lineage4.1.1.3 2
lineage4.9;lineage3.1.1 1
lineage4.2.1 7
lineage4.1.1 2
lineage4.3.4.2.1 2
lineage4;lineage2 1
lineage1.1.2 1
lineage4.1.2 2
lineage5.1.4 1
lineage4.3.2.1 2
lineage4.3.3 1
lineage4.6.2.2 3
lineage1.1.1 1
lineage4.8.2 1
La3 1
lineage4.1.3 1
lineage1.2.1.2.1 1
lineage2.1 1
lineage4.4.2 1
lineage4.5;lineage2.2 1
lineage4.7 2
lineage4.8.1 1
La1.3 8
lineage4.9;La1.3 2
spoligotype Counts
spoligotype Count
None 314
Geographic prevalence
Country level data for this variant is available for 12 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4796577 MDR-TB None
ERR4797350 Sensitive lineage4.9 None
ERR4797313 HR-TB None
ERR4798823 HR-TB lineage4 None
ERR4798431 HR-TB None
ERR4811030 Sensitive None
ERR4799547 Sensitive lineage2.2.1 None
ERR4811031 Sensitive lineage4.5 None
ERR6358951 HR-TB lineage4 None
ERR4812155 Sensitive None
ERR6198317 Other La1.2 None
ERR6359070 Other lineage4.9 None
ERR6359066 HR-TB lineage4 None
ERR6359069 Other lineage4.9 None
ERR7975644 Pre-XDR-TB lineage2.2.1 None
ERR6359074 HR-TB lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR736837 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR736831 HR-TB lineage4.9 None
ERR9786076 Sensitive lineage3 None
SRR1049674 HR-TB lineage2.2.1 None
ERR9787336 Other lineage6 None
SRR10315567 Other lineage2.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR1049675 HR-TB lineage2.2.1 None
SRR10315551 Sensitive lineage2.2.1 None
SRR11462861 Other La1.8.1 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1140736 RR-TB None
SRR10993951 RR-TB La1.6 None
SRR1173170 Other lineage4.9 None
SRR1172717 Other lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR1173385 Sensitive lineage4.9 None
SRR1173515 HR-TB lineage4.9 None
SRR1173770 Other lineage4.9 None
SRR1175491 MDR-TB lineage4 None
SRR1175472 MDR-TB lineage4 None
SRR1175500 MDR-TB lineage4 None
SRR1175487 Sensitive lineage4.9 None
SRR1175496 HR-TB lineage4.9 None
SRR1175507 MDR-TB lineage4 None
SRR1175506 Sensitive lineage4.9 None
SRR1175508 Other lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180440 Other lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181325 Sensitive lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR1181368 Other lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR11972300 MDR-TB lineage2.2.1 None
SRR1183054 Sensitive lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR1184329 MDR-TB lineage4.9 None
SRR1196478 MDR-TB lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR1196545 HR-TB lineage4.9 None
SRR13180203 Sensitive lineage4.2.2.1 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR16157123 Other lineage4.9 None
SRR13180206 Sensitive lineage4.8 None
SRR13180363 Sensitive lineage4.1.2.1 None
SRR13888750 Other La2 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR16370332 Sensitive lineage2.2.1 None
SRR18913742 Sensitive lineage3.1.3 None
SRR2100532 Sensitive lineage3 None
SRR20632814 Sensitive lineage4 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR3675477 Other lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
SRR12708416 Sensitive lineage4.1 None
SRR3675455 Sensitive lineage4 None
SRR3675473 Sensitive lineage4.9 None
SRR3675472 Sensitive lineage4.9 None
ERR4814396 Sensitive lineage4.1.1.3 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR3601585 Pre-XDR-TB lineage2.2 None
ERR3275450 Other lineage4 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR3675209 Sensitive lineage4.9 None
SRR3675210 Sensitive lineage4.9 None
ERR4814639 HR-TB lineage4 None
ERR4815471 Other lineage4.9 None
SRR3675229 Other lineage4 None
ERR171142 Other lineage4.9;lineage3.1.1 None
SRR3675266 Sensitive lineage4.9 None
SRR3675249 Sensitive lineage4.9 None
SRR3675292 Sensitive lineage4 None
SRR3675265 Other lineage4 None
SRR3675279 Other None
SRR3675283 Sensitive lineage4.9 None
SRR2024953 MDR-TB lineage2.2.1 cn
ERR4815963 Other lineage4.2.1 None
ERR4814963 Other lineage4.1.2.1 None
SRR3675318 Other lineage4.9 None
SRR3675387 Sensitive None
ERR4816964 Other lineage4.9 None
SRR3675510 Other None
SRR3675514 Sensitive lineage4.9 None
SRR3675537 Sensitive lineage4.9 None
SRR3675522 Other None
ERR4816656 HR-TB None
ERR4816113 Sensitive lineage4.1.1 None
SRR3675553 Sensitive lineage4.9 None
ERR4816470 Other lineage3 None
ERR4817488 Other lineage4.3.4.2.1 None
ERR3275709 HR-TB lineage3 nl
ERR216965 HR-TB lineage4.9 None
SRR3675542 Other lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR3675548 Sensitive lineage4.9 None
SRR3675577 Sensitive lineage4.9 None
ERR4817915 RR-TB lineage4.9 None
ERR4816755 Other lineage4.1.1.3 None
ERR4816800 Other lineage4.8 gb
ERR4816904 Sensitive lineage4.1.2.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4818710 Sensitive lineage4.9 None
ERR228175 Sensitive lineage3 None
ERR4816762 Other lineage4;lineage2 None
ERR4815815 Sensitive lineage4 None
ERR4817667 HR-TB lineage4.8 None
ERR4818431 Other lineage1.1.2 gb
ERR4817998 Other lineage3 None
ERR4818873 Other lineage4.1.2 gb
ERR4818929 HR-TB None
ERR4818561 HR-TB lineage4 None
ERR4818536 Other lineage4.9 None
ERR2512770 Other lineage4.2.1 None
SRR5341396 Other lineage4 None
ERR2513283 Other lineage5.1.4 None
ERR4818624 Other lineage4.3.4.2.1 None
ERR4817628 Sensitive lineage4.8 gb
ERR2513724 Sensitive lineage4.3.2.1 None
SRR5153091 HR-TB lineage4.3.3 None
ERR4819242 HR-TB lineage4.6.2.2 None
ERR4819357 Other lineage4.9 None
ERR4819314 Other lineage1.1.1 None
ERR4819383 RR-TB lineage4.9 None
ERR2514112 Sensitive lineage4.8.2 gb
ERR4819423 Other lineage4.6.2.2 None
ERR4819462 Other lineage4 None
ERR4819430 Sensitive lineage4.1.2.1 None
SRR5341437 Sensitive lineage4.9 None
ERR4819546 HR-TB lineage3 None
ERR4819641 HR-TB lineage4.6.2.2 None
ERR2446382 Other lineage4 None
ERR4819910 Other lineage4.9 None
SRR5341296 Sensitive lineage4.9 None
ERR4819933 Other lineage4.9 None
ERR2515230 Sensitive lineage4.8 None
ERR4820043 Sensitive lineage4.1.2.1 None
ERR4819952 Sensitive La3 None
SRR5341323 Sensitive lineage4 None
SRR5341345 Sensitive lineage4.9 None
SRR6045480 Other lineage4.1.1 None
ERR4821811 RR-TB lineage4.9 None
ERR2517475 Other lineage4 None
SRR6045664 Other lineage4.2.1 None
SRR6045503 HR-TB None
ERR4821263 Other lineage4.1.3 gb
ERR4822150 Other lineage4.8 gb
SRR6046117 RR-TB lineage4.9 None
ERR4821172 RR-TB lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR6046141 Other lineage4.9 None
SRR6045706 Sensitive lineage4 None
SRR6045832 HR-TB lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
SRR6046385 Other lineage4.9 None
SRR6045371 Sensitive lineage4.2.1 None
SRR6045191 Sensitive lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
ERR2851356 Sensitive lineage4.9 None
ERR4829238 Sensitive lineage3 None
SRR6046442 Other lineage3 None
ERR4829336 Other lineage4 None
SRR6046897 Sensitive lineage4 None
SRR6046579 MDR-TB lineage1.2.1.2.1 gb
SRR6046802 Other lineage4 None
SRR6046611 HR-TB lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR323037 HR-TB lineage4 None
ERR4832052 HR-TB lineage2.1 vn
SRR6855695 Sensitive lineage4.8 None
ERR4831787 HR-TB lineage4.4.2 vn
ERR4831638 Sensitive None
ERR4831763 HR-TB lineage4.5;lineage2.2 None
SRR6982196 Sensitive None
ERR502943 HR-TB None
SRR9971114 Other lineage2.2.1 None
SRR7496471 Sensitive None
SRR7496523 Other lineage4.7 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR7645928 RR-TB lineage4.7 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR9971080 RR-TB lineage2.2.1 None
SRR9970980 Other lineage4.1.2 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR7645899 RR-TB lineage2.2.1 None
SRR7645906 Other lineage2.2.1 None
SRR7645971 Other lineage2.2.1 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR9971112 Other lineage2.2.1 None
SRR7755649 MDR-TB lineage4.2.1 None
ERR037234 Sensitive lineage4.9 None
SRR7755655 Other lineage4.1.2.1 None
SRR9971113 Other lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
ERR067712 HR-TB lineage4 None
ERR1063855 Other lineage4 None
ERR3283021 HR-TB None
ERR10796597 Other lineage4 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR349298 Sensitive lineage4 None
ERR3468488 RR-TB La1.8.1 None
ERR349264 Sensitive lineage4 None
ERR349265 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR349299 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR363437 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR369156 Sensitive lineage4.9 None
ERR363479 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR369151 Sensitive lineage4.9 None
ERR363499 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR373945 HR-TB lineage4 None
ERR369159 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR369158 Sensitive lineage4 None
ERR369162 Sensitive lineage4 None
ERR369163 Sensitive lineage4 None
ERR373946 Sensitive lineage4 None
ERR373947 Sensitive lineage4 None
ERR473303 Sensitive lineage4.9 None
ERR3797047 HR-TB lineage4 None
ERR400320 Sensitive lineage4 None
ERR400326 Sensitive lineage4 None
ERR4178226 Sensitive lineage4 None
ERR4596902 HR-TB lineage3 None
ERR4596910 Sensitive lineage4 None
ERR3797081 Sensitive lineage4 None
ERR400336 Sensitive lineage4 None
ERR400345 Other lineage4 None
ERR4178309 Other lineage4.1.2.1 None
ERR473323 HR-TB lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR473367 Sensitive lineage4.9 None
ERR4769408 Other La1.3 None
ERR4769436 Other La1.3 None
ERR4769516 Other La1.3 None
ERR4769442 HR-TB lineage4 None
ERR4769444 HR-TB lineage4.9 None
ERR4769506 Sensitive La1.3 None
ERR4769512 Sensitive lineage4.9 None
ERR4769547 Sensitive lineage4.9;La1.3 None
ERR4769514 Other La1.3 None
ERR4769518 Sensitive lineage4.9 None
ERR4769551 Other La1.3 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4769552 Other La1.3 None
ERR4769555 Other La1.3 None