EBG00000313339 - n.99G>T
Drug resistance types
126 Sensitive
5 RR-TB
37 HR-TB
14 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
48 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 146 |
| lineage2.2.1 | 20 |
| lineage4.4.1.1.1 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage4.3.3 | 4 |
| lineage2.2.1;lineage4 | 2 |
| lineage4.1.2.1 | 4 |
| La1.3 | 5 |
| lineage4.1.1.3 | 3 |
| lineage4.8.1 | 1 |
| lineage4.8 | 3 |
| lineage2.2.2 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage4 | 4 |
| lineage4.2.1 | 2 |
| 1 | |
| lineage3;lineage4.9 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.3.2.1 | 4 |
| lineage4.7 | 2 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage6.1.3 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.4.1.1 | 2 |
| lineage3 | 8 |
| La1.2 | 1 |
| La1;lineage4.9 | 1 |
| lineage1.1.1 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.5 | 1 |
| lineage1.2.2.2 | 1 |
| lineage5.1.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 236 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045359 | Sensitive | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1175496 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR369158 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR1172717 | Sensitive | lineage4.9 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR176741 | Other | lineage4.9 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | ERR349299 | Other | lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | SRR2024953 | MDR-TB | lineage2.2.1 | cn | ERR867566 | Other | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR12708416 | Sensitive | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR3675542 | Other | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR7645928 | Other | lineage4.7 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR11972300 | MDR-TB | lineage2.2.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | ERR369151 | Other | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR7645899 | Other | lineage2.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR216965 | Sensitive | lineage4.9 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR1184308 | Sensitive | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR323037 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4769552 | Sensitive | La1.3 | None | ERR4819546 | HR-TB | lineage3 | None | ERR363502 | Other | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR6198317 | Other | La1.2 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR2100532 | Sensitive | lineage3 | None | ERR4769514 | Other | La1.3 | None | ERR3797081 | Sensitive | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR6045832 | Other | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819241 | Other | lineage4.9 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1180250 | Other | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR1180345 | Other | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR349265 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR1175508 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | lineage4 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR3675318 | Other | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR363499 | Sensitive | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR4769555 | Sensitive | La1.3 | None | ERR4829238 | Sensitive | lineage3 | None | SRR1181368 | Other | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR228175 | Sensitive | lineage3 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1181214 | Other | lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR1049675 | HR-TB | lineage2.2.1 | None |
|---|
