Rv3596c - c.243C>T
Drug resistance types
29 Sensitive
8 RR-TB
22 HR-TB
20 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
23 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 44 |
| lineage2.2.1;lineage4 | 1 |
| La1.8.1 | 1 |
| lineage2.2.1 | 10 |
| lineage5.1.1 | 3 |
| La1.7;lineage4.9 | 2 |
| lineage3.1.2.2 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.8;lineage4.9 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| 3 | |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage6.1.1 | 2 |
| lineage4.1.2 | 1 |
| lineage4.1.2.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.8.1 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.8 | 1 |
| lineage4.5 | 1 |
| lineage4.3.2.1 | 1 |
| lineage2.2 | 1 |
| La2;lineage4.9 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage5.1.4 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage4.4.1.1.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 102 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR400320 | Sensitive | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR1791747 | Other | La1.8.1 | None | ERR6866639 | HR-TB | lineage4.9 | None | SRR6280248 | Sensitive | lineage2.2.1 | cn | SRR1172310 | MDR-TB | lineage4.9 | None | ERR702402 | Other | lineage5.1.1 | gh | SRR6046245 | Other | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | SRR3675235 | HR-TB | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR12708384 | Sensitive | lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR6280212 | Sensitive | lineage2.2.1 | cn | SRR3675387 | Other | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR3675246 | Other | lineage4.9 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | ERR133986 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR12708416 | Sensitive | None | SRR3675441 | RR-TB | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR9787014 | RR-TB | lineage6.1.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR987729 | MDR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | ERR4811030 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR3675585 | HR-TB | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4796254 | Other | lineage4.9 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR751338 | Other | lineage5.1.1 | None | SRR3675247 | Other | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR6046611 | Sensitive | lineage4.9 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR3799304 | RR-TB | lineage6.1.1 | None | ERR502494 | Other | lineage5.1.1 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR1063896 | HR-TB | None | ERR987722 | MDR-TB | None | SRR9971114 | Other | lineage2.2.1 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None |
|---|
