Rv3596c - c.243C>T
Drug resistance types
69 Sensitive
6 RR-TB
33 HR-TB
10 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
44 Other
lineage Counts
| lineage | Count |
|---|---|
| 43 | |
| lineage4.1 | 1 |
| lineage4 | 28 |
| lineage4.9 | 55 |
| lineage2.2.1 | 12 |
| lineage5.1.4 | 1 |
| lineage3 | 1 |
| lineage5.1.1 | 3 |
| lineage4.1.2.1 | 2 |
| lineage2.1 | 1 |
| lineage2.2.1.1 | 1 |
| La2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.8 | 2 |
| lineage4.8.1 | 1 |
| lineage6.1.1 | 2 |
| lineage3.1.2 | 1 |
| lineage2.2 | 1 |
| lineage4.5 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| La1.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 163 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675501 | HR-TB | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR8692905 | HR-TB | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR6280248 | Sensitive | lineage2.2.1 | cn | ERR158583 | HR-TB | None | SRR3675279 | Other | None | SRR8692807 | Other | lineage4.9 | None | SRR8692898 | Other | lineage4.9 | None | SRR6280212 | Sensitive | lineage2.2.1 | cn | SRR3675477 | Other | lineage4.9 | None | SRR3675488 | HR-TB | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675222 | Other | None | SRR3675229 | Other | lineage4 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | ERR176740 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675502 | Other | None | SRR3675522 | Other | None | ERR2513283 | Other | lineage5.1.4 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675550 | Other | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341387 | Other | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341418 | Other | None | SRR5341470 | HR-TB | None | ERR702402 | Other | lineage5.1.1 | gh | SRR5341455 | Sensitive | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341469 | Other | lineage4 | None | SRR6046245 | Other | lineage4.9 | None | SRR6045519 | HR-TB | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6046362 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046397 | Other | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046824 | HR-TB | None | ERR4831618 | MDR-TB | lineage2.1 | None | SRR6511621 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR502494 | Other | lineage5.1.1 | None | ERR4831638 | Sensitive | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR502889 | Other | None | ERR502524 | HR-TB | La2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR502943 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323053 | HR-TB | None | ERR323039 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1035122 | Sensitive | None | ERR067681 | HR-TB | None | ERR1063896 | Sensitive | None | ERR137286 | Sensitive | lineage4 | None | ERR133986 | HR-TB | None | ERR400345 | Other | lineage4 | None | ERR3439432 | Other | None | ERR400326 | Sensitive | lineage4 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR400320 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4024991 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4798099 | Other | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798406 | HR-TB | None | ERR4811030 | Sensitive | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4799378 | Sensitive | lineage4 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR4812155 | Sensitive | None | ERR6866022 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR736865 | HR-TB | None | SRR1172310 | HR-TB | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1158918 | Sensitive | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR751338 | Other | lineage5.1.1 | None | ERR987722 | HR-TB | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1174897 | HR-TB | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR13837507 | HR-TB | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None |
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