lineage | Count |
---|---|
lineage4.9 | 23 |
lineage4.5 | 2 |
lineage4 | 25 |
lineage2.2.1 | 5 |
lineage4.1.1.3 | 1 |
29 | |
lineage2.2 | 3 |
lineage4.1 | 1 |
lineage3 | 2 |
lineage5.1.4 | 1 |
lineage4.2.1 | 1 |
lineage4.3.4.1 | 1 |
lineage4.3.4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 95 |
ID | Drug resistance | Lineage | Country iso2 | SRR1175496 | HR-TB | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR13591342 | HR-TB | lineage4.1.1.3 | None | SRR14782405 | HR-TB | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | SRR3675229 | Other | lineage4 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675279 | Other | None | SRR3675318 | Other | lineage4.9 | None | SRR3675555 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675456 | HR-TB | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4816466 | HR-TB | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341456 | Other | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5341396 | Other | lineage4 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341313 | HR-TB | None | ERR2446382 | Other | lineage4 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341315 | Sensitive | None | SRR5341323 | Sensitive | lineage4 | None | SRR6045217 | Other | lineage4 | None | ERR2517475 | Other | lineage4 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046245 | Other | lineage4.9 | None | SRR6045399 | Other | None | SRR6046225 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046492 | Other | None | ERR349298 | Sensitive | lineage4 | None | ERR4831117 | HR-TB | None | ERR4831638 | Sensitive | None | ERR502943 | HR-TB | None | ERR11465151 | Sensitive | lineage4.3.4.1 | None | ERR349264 | Sensitive | lineage4 | None | SRR8217918 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR11465015 | Sensitive | lineage4.3.4.2.1 | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None | ERR349330 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR3797046 | HR-TB | None | ERR373945 | HR-TB | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4798431 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811030 | Sensitive | None | ERR4811493 | HR-TB | None | ERR4812155 | Sensitive | None |
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