lineage | Count |
---|---|
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4.9 | 2 |
lineage4.2;La1.7 | 1 |
lineage4 | 6 |
30 | |
lineage4.3.4.2.1 | 1 |
lineage2.2.1 | 2 |
lineage2.2.1.1 | 1 |
lineage2.2 | 3 |
lineage4;lineage3.1 | 1 |
lineage4.5 | 1 |
lineage1.2.1.2 | 1 |
lineage3 | 1 |
spoligotype | Count |
---|---|
None | 51 |
ID | Drug resistance | Lineage | Country iso2 | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR3675477 | Other | lineage4.9 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675488 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675510 | Other | None | SRR3675222 | Other | None | SRR3675279 | Other | None | SRR3675501 | HR-TB | None | SRR3675229 | Other | lineage4 | None | SRR3675387 | Sensitive | None | ERR212121 | HR-TB | None | SRR3675522 | Other | None | ERR212001 | HR-TB | None | SRR3675550 | Other | None | SRR5341418 | Other | None | ERR4816466 | HR-TB | None | SRR6045519 | HR-TB | None | ERR2515228 | Other | lineage2.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6044876 | Sensitive | lineage4 | None | SRR6046460 | HR-TB | None | SRR6046210 | Other | lineage4 | None | SRR6046225 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR3797036 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6982365 | Other | lineage2.2.1 | None | ERR1034652 | Other | None | ERR4811030 | Sensitive | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4798406 | HR-TB | None | ERR6336802 | Other | lineage1.2.1.2 | None | ERR4812155 | Sensitive | None | ERR736839 | Other | None | ERR6358991 | HR-TB | None | ERR736835 | HR-TB | None | ERR9896144 | Other | lineage3 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None |
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