Rv3596c - c.483G>A
Drug resistance types
2 Sensitive
1 RR-TB
13 HR-TB
4 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
7 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage4.9 | 2 |
| M.canetti;lineage2.2 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage4.5 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage4.9 | 6 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage2.2.1.1 | 1 |
| 1 | |
| La3;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 29 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None |
| ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None |
| SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None |
| ERR4811031 | Sensitive | lineage4.5 | None |
| ERR161034 | HR-TB | lineage4.3.4.2.1 | None |
| SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
| SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
| ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None |
| SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None |
| ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
| SRR23961559 | Other | La1.7;lineage4.2 | None |
| ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None |
| ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None |
| ERR3797028 | HR-TB | M.canetti;lineage4.9 | None |
| SRR6046133 | HR-TB | lineage4.9 | None |
| SRR6045219 | HR-TB | lineage4.9 | None |
| ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None |
| ERR4816466 | HR-TB | lineage4.9 | None |
| ERR4812155 | Other | lineage4.9 | None |
| ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None |
| SRR6079962 | HR-TB | lineage2.2.1.1 | None |
| ERR212001 | HR-TB | None | |
| SRR6045555 | Other | lineage4.9 | None |
| SRR3675510 | Sensitive | La3;lineage4.9 | None |
| SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None |
| ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None |
| ERR9896144 | Other | lineage3 | None |
| SRR3675461 | RR-TB | lineage4.9 | None |
