lineage | Count |
---|---|
lineage4.9 | 115 |
lineage4 | 5 |
lineage4.9;lineage7 | 3 |
lineage2.2;lineage4 | 1 |
lineage2.2.1 | 14 |
La3;lineage4.9 | 7 |
lineage4.3.3 | 2 |
lineage4.3.2.1 | 3 |
lineage4.1.2.1 | 4 |
lineage3 | 3 |
lineage4.8 | 12 |
lineage1.1.1;lineage4 | 1 |
lineage3.1.3 | 1 |
lineage4.7 | 2 |
lineage4.1.1.3;lineage4.9 | 2 |
lineage1;lineage4.9 | 1 |
lineage4.2.1 | 3 |
lineage4.1.1.1 | 1 |
lineage4.5 | 1 |
lineage2.2.1.2 | 1 |
lineage1.1.3.2 | 1 |
lineage2.1;lineage4.9 | 1 |
lineage1.2.1.1 | 1 |
lineage4.4 | 1 |
lineage4.1;lineage4.9 | 2 |
lineage4.4.1.1 | 2 |
lineage1.1.3.1 | 1 |
lineage5.1.4 | 1 |
lineage2.1;lineage4.9;lineage7 | 1 |
La3;lineage4 | 1 |
2 | |
lineage2.2.1;lineage4 | 1 |
lineage4.1.2 | 1 |
lineage3.1.2.1 | 1 |
La3;M.canetti;lineage4.9 | 1 |
lineage4.6.3;lineage4.9 | 1 |
lineage1.1.1 | 1 |
lineage4.2.1.1;lineage4.3.3 | 1 |
spoligotype | Count |
---|---|
None | 203 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR400320 | Sensitive | lineage4.9 | None |
SRR3675265 | Other | lineage4 | None |
SRR6045191 | Sensitive | lineage4.9 | None |
SRR6046210 | Other | lineage4.9 | None |
ERR6866410 | Sensitive | lineage4.9 | None |
ERR702405 | Sensitive | lineage4.9 | None |
SRR3675231 | MDR-TB | lineage4.9;lineage7 | None |
SRR16156832 | RR-TB | lineage2.2;lineage4 | None |
ERR4799547 | HR-TB | lineage2.2.1 | None |
ERR6359066 | HR-TB | lineage4.9 | None |
SRR5341345 | Sensitive | lineage4.9 | None |
ERR6865502 | Sensitive | lineage4 | None |
SRR11662694 | Other | lineage4.9 | None |
ERR363449 | Sensitive | lineage4.9 | None |
ERR3283047 | Sensitive | La3;lineage4.9 | None |
SRR7496471 | Sensitive | lineage4 | None |
SRR10380127 | Other | lineage4.3.3 | None |
ERR3283011 | Other | La3;lineage4.9 | None |
SRR5341461 | HR-TB | lineage4.9 | None |
SRR9970981 | RR-TB | lineage4.3.2.1 | None |
ERR400326 | Other | lineage4.9 | None |
SRR6046802 | Other | lineage4.9 | None |
ERR349298 | Sensitive | lineage4.9 | None |
ERR4816904 | Sensitive | lineage4.1.2.1 | None |
SRR6046564 | Sensitive | lineage4.9 | None |
ERR1035122 | Sensitive | lineage4.9 | None |
ERR3797064 | Other | La3;lineage4.9 | None |
ERR4812155 | Other | lineage4.9 | None |
SRR12416842 | HR-TB | lineage4.9 | None |
ERR363445 | Other | lineage4.9 | None |
ERR4819546 | HR-TB | lineage3 | None |
ERR363502 | Other | lineage4.9 | None |
SRR6045050 | Sensitive | lineage4.3.2.1 | None |
SRR5341308 | Sensitive | lineage4.9 | None |
SRR16156697 | RR-TB | lineage2.2.1 | None |
SRR6045706 | Sensitive | lineage4.9 | None |
ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None |
ERR373947 | Other | lineage4.9 | None |
ERR502470 | RR-TB | lineage4.9 | None |
ERR349266 | Sensitive | lineage4.9 | None |
ERR373946 | Sensitive | lineage4.9 | None |
SRR3675472 | Sensitive | lineage4.9 | None |
SRR6045892 | Sensitive | lineage4.9 | None |
SRR3675585 | Sensitive | lineage4.9 | None |
ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None |
SRR2010299 | MDR-TB | lineage2.2.1 | None |
ERR2513121 | Sensitive | lineage3.1.3 | None |
SAMEA3501070 | RR-TB | lineage4.8 | None |
ERR6359070 | Sensitive | lineage4.9 | None |
ERR363456 | Sensitive | lineage4.9 | None |
SAMEA3501067 | RR-TB | lineage4.8 | None |
ERR349330 | Sensitive | lineage4.9 | None |
ERR2513229 | MDR-TB | lineage2.2.1 | None |
SRR7496523 | Other | lineage4.7 | None |
SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None |
SRR6045002 | RR-TB | lineage4.9 | None |
SRR6046382 | Sensitive | lineage2.2.1 | None |
SRR3675477 | Sensitive | lineage4.9 | None |
ERR4797350 | Sensitive | lineage1;lineage4.9 | None |
ERR2512770 | Sensitive | lineage4.2.1 | None |
SRR14782539 | MDR-TB | lineage4.2.1 | None |
SRR7645928 | Other | lineage4.7 | None |
ERR2513724 | Sensitive | lineage4.3.2.1 | None |
ERR4811030 | Sensitive | lineage4.9 | None |
ERR4816113 | Sensitive | lineage4.1.1.1 | None |
SRR1175052 | HR-TB | lineage4.9 | None |
ERR978733 | RR-TB | lineage4.8 | None |
ERR363453 | Sensitive | lineage4.9 | None |
SRR9971114 | Other | lineage2.2.1 | None |
ERR736872 | HR-TB | lineage4.9 | None |
ERR4811031 | Sensitive | lineage4.5 | None |
ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None |
ERR7821126 | Sensitive | lineage1.1.3.2 | None |
SRR12708409 | HR-TB | lineage4.3.3 | None |
SRR3675580 | Sensitive | lineage4.9 | None |
SRR12708384 | Sensitive | lineage4.9 | None |
SRR3675522 | Other | lineage4.9 | None |
ERR4821686 | Sensitive | lineage4.1.2.1 | None |
SRR3675495 | Other | lineage2.1;lineage4.9 | None |
ERR4178309 | Other | lineage4.1.2.1 | None |
ERR363506 | Sensitive | lineage4.9 | None |
ERR363490 | Sensitive | lineage4.9 | None |
ERR363421 | Sensitive | lineage4.9 | None |
ERR067712 | Sensitive | lineage4.9 | None |
ERR4798099 | Other | lineage4.9 | None |
ERR4831616 | MDR-TB | lineage2.2.1 | None |
ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None |
ERR4814734 | Other | lineage1.2.1.1 | None |
ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None |
ERR363437 | Sensitive | lineage4.9 | None |
ERR349265 | Other | lineage4.9 | None |
ERR373945 | Sensitive | lineage4.9 | None |
SRR16627752 | RR-TB | lineage4.4 | None |
ERR3283014 | Sensitive | La3;lineage4.9 | None |
ERR1063855 | Other | lineage4.9 | None |
SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None |
SRR12708398 | Sensitive | lineage4.4.1.1 | None |
SRR3675577 | Sensitive | lineage4.9 | None |
ERR363426 | Sensitive | lineage4.9 | None |
SRR6046897 | Sensitive | lineage4.9 | None |
ERR363474 | Sensitive | lineage4.9 | None |
ERR3797063 | Sensitive | La3;lineage4.9 | None |
ERR4178226 | Sensitive | lineage4 | None |
SRR22424787 | Sensitive | lineage4.9 | None |
ERR4816470 | HR-TB | lineage3 | None |
ERR4797184 | Sensitive | lineage4.9 | None |
ERR124636 | Sensitive | lineage4.9 | None |
SRR3675582 | Other | lineage4.9 | None |
ERR6865513 | Other | lineage4.1.2.1 | None |
ERR349299 | Other | lineage4.9 | None |
SRR6044876 | Sensitive | lineage4.9 | None |
SRR6046245 | Other | lineage4.9 | None |
ERR4814639 | HR-TB | lineage4.9 | None |
SRR20970043 | MDR-TB | lineage2.2.1 | None |
ERR400336 | Sensitive | lineage4.9 | None |
SRR6045371 | Other | lineage4.9 | None |
SRR3675260 | Sensitive | lineage4.9 | None |
ERR363509 | Sensitive | lineage4.9 | None |
ERR363499 | Sensitive | lineage4.9 | None |
SRR1172885 | HR-TB | lineage4.9 | None |
SRR3675229 | Sensitive | lineage4.9 | None |
ERR369160 | Sensitive | lineage4.9 | None |
ERR3797062 | RR-TB | lineage4.9 | None |
ERR8479578 | Sensitive | lineage1.1.3.1 | None |
SRR3675247 | Other | lineage4.9 | None |
SRR9970979 | Sensitive | lineage4.8 | None |
ERR736834 | Sensitive | lineage4.9 | None |
SRR9971112 | Other | lineage2.2.1 | None |
ERR3283006 | RR-TB | lineage4.9 | None |
ERR4815815 | Sensitive | lineage4.9 | None |
ERR349296 | Sensitive | lineage4.9 | None |
ERR2513283 | Sensitive | lineage5.1.4 | None |
ERR363446 | Sensitive | lineage4.9 | None |
ERR3797087 | Sensitive | lineage4.9 | None |
ERR4819462 | Sensitive | lineage4.9 | None |
ERR978734 | RR-TB | lineage4.8 | None |
SRR17567917 | RR-TB | lineage4.4.1.1 | None |
SRR3675539 | HR-TB | lineage4.9;lineage7 | None |
SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None |
SRR6045503 | Sensitive | lineage4.9 | None |
ERR4796254 | Sensitive | lineage4.9 | None |
ERR363500 | Sensitive | lineage4.9 | None |
SRR6045010 | Sensitive | lineage4.9 | None |
ERR369162 | Other | lineage4.9 | None |
SRR6045359 | Sensitive | lineage4.9 | None |
ERR3283028 | Other | La3;lineage4 | None |
ERR369163 | Sensitive | lineage4.9 | None |
ERR363498 | Sensitive | lineage4.9 | None |
ERR4798823 | HR-TB | None | |
ERR502943 | Sensitive | lineage2.2.1;lineage4 | None |
SRR5341296 | Sensitive | lineage4.9 | None |
SRR9970980 | HR-TB | lineage4.1.2 | None |
ERR4817204 | Other | lineage4.9 | None |
ERR4816717 | RR-TB | lineage3.1.2.1 | None |
ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None |
SRR6046577 | Other | lineage4.6.3;lineage4.9 | None |
ERR3797048 | Other | La3;lineage4.9 | None |
ERR4817667 | HR-TB | lineage4.8 | None |
SRR3675455 | Sensitive | lineage4.9 | None |
SRR5341300 | HR-TB | lineage4.9 | None |
SRR3675279 | Sensitive | lineage4.9 | None |
ERR349300 | Sensitive | lineage4.9 | None |
ERR363479 | Sensitive | lineage4.9 | None |
ERR369161 | Sensitive | lineage4.9 | None |
SRR3675473 | Sensitive | lineage4.9 | None |
SAMEA3501065 | RR-TB | lineage4.8 | None |
SRR3675235 | Sensitive | lineage4.9 | None |
ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None |
SRR16156817 | Other | lineage4.9 | None |
ERR400345 | Other | lineage4.9 | None |
SRR6511621 | Sensitive | lineage4.9 | None |
ERR4596902 | MDR-TB | lineage3 | None |
SRR3675387 | Other | lineage4.9 | None |
SRR3675246 | Other | lineage4.9 | None |
SRR3675456 | RR-TB | lineage4.9;lineage7 | None |
SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None |
ERR363447 | Other | lineage4.9 | None |
SRR6044819 | Sensitive | lineage4.9 | None |
ERR779852 | Sensitive | lineage4.9 | None |
SRR9971080 | RR-TB | lineage2.2.1 | None |
SRR12708416 | Sensitive | None | |
ERR3283057 | Sensitive | La3;lineage4.9 | None |
SRR10315551 | Sensitive | lineage2.2.1 | None |
SAMEA3501052 | RR-TB | lineage4.8 | None |
ERR4797264 | Sensitive | lineage4.9 | None |
ERR10762297 | MDR-TB | lineage4.2.1 | None |
ERR369159 | Sensitive | lineage4.9 | None |
ERR4818536 | Other | lineage4.9 | None |
ERR2517475 | Other | lineage4 | None |
ERR349264 | Sensitive | lineage4.9 | None |
ERR4797313 | Sensitive | lineage2.2.1 | None |
ERR4797474 | Sensitive | lineage4.9 | None |
SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None |
SRR6046385 | Sensitive | lineage4.9 | None |
ERR4819314 | Other | lineage1.1.1 | None |
ERR323066 | Sensitive | lineage4.9 | None |
SRR6046611 | Sensitive | lineage4.9 | None |
ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None |
SRR15315797 | RR-TB | lineage2.2.1 | None |
ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None |
ERR387051 | Other | lineage4.9 | None |
ERR369158 | Other | lineage4.9 | None |
ERR502511 | Sensitive | lineage4.9 | None |