Rv0006 - c.378G>C


Drug resistance types
32 Sensitive 5 RR-TB 56 HR-TB 12 MDR-TB 1 Pre-XDR-TB 2 XDR-TB 63 Other
lineage Counts
lineage Count
lineage2.2.1 2
lineage3.1 2
lineage2.1 1
lineage4.9 73
lineage2.2.1.1 1
lineage4.1.2.1 5
lineage4.6.3;lineage4.9 1
6
M.canetti;lineage2.2 2
lineage4.9;lineage6.3 6
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.3.4 1
M.canetti;lineage4.9;lineage9 1
La3;lineage4.9 8
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.1.2 1
lineage4 4
La3;M.canetti;lineage4.9 1
La1.8.1 2
La1.7;lineage4.9 1
La2;lineage4.9 2
lineage2.1;lineage4.9 2
lineage4.9;lineage9 3
lineage3.1.2.2 1
lineage4.3.2.1 1
La1;lineage4.9 1
lineage4.1.1.1 1
La2;lineage4.9;lineage9 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.4.1.2 1
lineage4.3.4.1 2
lineage4.3.4.2 2
La3;lineage2.1;lineage4.9 2
lineage4.8 1
lineage6.1.2 1
La1.7;M.canetti;lineage4.9 2
lineage4.3.3 1
lineage2.1;lineage4.9;lineage6.3 2
lineage4.3.4.2.1 2
lineage4.9;lineage7 2
lineage3 2
lineage3.1.2.1;lineage3.1.2.2 1
La3;lineage4 1
La2;lineage2.2 1
lineage4.3.1;lineage4.9;lineage6 1
M.canetti;lineage4.9 1
lineage1.1.3.1 1
lineage1.1.2 1
La1;lineage4.1.2 1
lineage4.3.2;lineage4.9 1
lineage4.9;lineage6.1.3 1
lineage4.5 1
M.canetti;lineage2.1;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 2
lineage1;lineage4.9 1
M.canetti;lineage1 1
spoligotype Counts
spoligotype Count
None 171
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR26937107 MDR-TB lineage2.2.1 None
SRR28351442 HR-TB lineage3.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR4769452 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR7131023 Other lineage4.1.2.1 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR212001 HR-TB None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR1180226 HR-TB lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR6046878 Other lineage4.9 None
ERR13285192 Sensitive lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR6866807 Other lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4819241 Other lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
SRR3675270 Other lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR736817 HR-TB lineage4.3.4 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR26399973 Other La3;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR6046210 Other lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR6045053 Other lineage4 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR6046046 Other lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR4798099 Other lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3283030 HR-TB lineage4.9 None
SRR26399490 Sensitive lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR3283011 Other La3;lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR400326 Other lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR1165699 Other lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR26159035 Sensitive lineage4.9 None
ERR11465232 Sensitive lineage4.1.2.1 None
ERR3797064 Other La3;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR9786346 Sensitive lineage4.3.4.2 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR2229542 Other lineage4.8 None
ERR9787030 RR-TB lineage6.1.2 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR10561898 Sensitive lineage4.3.3 None
SRR1184381 MDR-TB None
ERR987722 MDR-TB None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR181824 HR-TB lineage4.9 None
ERR176549 Other lineage4.3.4.2.1 None
ERR3283055 HR-TB lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
SRR6045555 Other lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR17832802 HR-TB lineage3 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR4407463 HR-TB None
SRR26399239 Sensitive lineage4.9 None
SRR1196583 Other lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR3283028 Other La3;lineage4 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR2027263 Other lineage4 None
ERR3797015 HR-TB lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
SRR11662694 Other lineage4.9 None
SRR6789626 Other None
ERR3797063 Sensitive La3;lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR4798504 RR-TB lineage3 None
ERR1063846 HR-TB lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR6511621 Sensitive lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR9634265 Sensitive lineage4.3.4.2 None
SRR6045371 Other lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR3797073 Other La1.8.1 None
SRR12416842 HR-TB lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR4816656 Other lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
ERR473332 Other lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
SRR29017461 Other La3;lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR1184294 Other lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR11252664 Other lineage2.2.1 None
ERR4797474 Sensitive lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4798823 HR-TB lineage4 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR3283040 HR-TB lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR10809074 Sensitive lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR29096879 Sensitive lineage4.9 None
SRR8692887 Other None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
ERR11465235 Sensitive lineage4.3.4.2.1 None
ERR13285191 Sensitive lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR3797047 MDR-TB lineage4.9 None