Rv0006 - c.378G>C
Drug resistance types
40 Sensitive
5 RR-TB
93 HR-TB
14 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
56 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 42 |
| lineage4.9 | 20 |
| lineage4.1.1 | 2 |
| lineage4.1.2.1 | 5 |
| 95 | |
| lineage4.3 | 1 |
| lineage4.8 | 4 |
| lineage5.1.4 | 1 |
| lineage4.1 | 2 |
| lineage4.1.1.2 | 1 |
| lineage1.1.1 | 1 |
| lineage4.1.2 | 3 |
| lineage4.2.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage2.2 | 3 |
| lineage2.2.1 | 4 |
| lineage2.2.1.1 | 3 |
| La2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.3.4.2.1 | 2 |
| La1.8.1 | 2 |
| lineage2 | 1 |
| lineage1.1.2 | 1 |
| lineage3 | 2 |
| lineage4.5 | 1 |
| lineage3.1.2 | 1 |
| lineage4.3.4 | 1 |
| lineage1.1.3.1 | 1 |
| lineage6 | 1 |
| lineage4.3.4.2 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| La3 | 1 |
| lineage4.3.3 | 2 |
| lineage3.1 | 1 |
| lineage4.9;La3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 213 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4814639 | HR-TB | lineage4 | None | SRR26159035 | Sensitive | lineage4.9 | None | ERR176793 | Other | lineage4.1.1 | None | SRR3085297 | MDR-TB | lineage4.9 | None | SRR3086368 | MDR-TB | lineage4.9 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675270 | HR-TB | None | SRR3675265 | Other | lineage4 | None | ERR176740 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR4816656 | HR-TB | None | SRR3675510 | Other | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR212138 | HR-TB | lineage4 | None | ERR2229542 | Other | lineage4.8 | None | ERR212001 | HR-TB | None | ERR4817060 | RR-TB | None | SRR3675574 | HR-TB | None | ERR2513283 | Other | lineage5.1.4 | None | ERR4817735 | Other | lineage4.8 | None | ERR2510863 | MDR-TB | lineage4.9 | None | ERR234659 | HR-TB | None | ERR4818929 | HR-TB | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341302 | HR-TB | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341456 | Other | None | SRR6045526 | HR-TB | None | SRR5341470 | HR-TB | None | SRR6045503 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | ERR2679270 | HR-TB | lineage4.1.2 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR2693227 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | SRR6045327 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6046133 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045053 | Other | None | SRR6046046 | Other | None | SRR6046210 | Other | lineage4 | None | SRR6046594 | HR-TB | lineage4 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6045399 | Other | None | SRR6046225 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | SRR6046802 | Other | lineage4 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6789626 | Other | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6511621 | HR-TB | None | ERR4831117 | HR-TB | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR502524 | HR-TB | La2 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323108 | HR-TB | lineage4 | None | ERR323039 | HR-TB | None | ERR323045 | HR-TB | None | ERR323053 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR11465235 | Sensitive | lineage4.3.4.2.1 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063862 | HR-TB | None | ERR1063857 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR1063858 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR3283014 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283028 | Other | None | ERR3283021 | HR-TB | None | ERR3283024 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797017 | Other | None | ERR3797063 | HR-TB | None | ERR3797044 | Other | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR400326 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR400345 | Other | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4024991 | Other | None | ERR4188247 | HR-TB | None | ERR4407463 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769521 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR4797313 | HR-TB | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4798431 | HR-TB | None | ERR4798504 | Other | lineage3 | None | ERR4811142 | MDR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4811022 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4811030 | Sensitive | None | ERR4811105 | HR-TB | None | ERR6866022 | Other | None | ERR4811493 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR6866410 | Sensitive | None | ERR6866639 | Other | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR736875 | HR-TB | lineage4 | None | ERR7910877 | MDR-TB | lineage4.1.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736848 | HR-TB | None | ERR736865 | HR-TB | None | ERR736874 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9787030 | Sensitive | lineage6 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9634265 | Sensitive | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | SRR1169194 | Other | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR1167384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR1169249 | Other | La3 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1172857 | MDR-TB | None | SRR1172310 | HR-TB | None | SRR1172234 | Other | None | SRR1173400 | Other | None | SRR1172951 | Other | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1175049 | RR-TB | None | SRR1174897 | HR-TB | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184381 | MDR-TB | None | SRR1184294 | HR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184388 | Other | None | SRR1184380 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR14801749 | Sensitive | None | SRR1196768 | MDR-TB | None | SRR16157123 | Other | lineage4.9 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR8692887 | Other | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | SRR1791747 | Other | La1.8.1 | None | SRR8692790 | RR-TB | lineage4 | None | SRR8692893 | Other | lineage4.9 | None | SRR8692905 | HR-TB | None | SRR8692818 | Other | lineage4.9 | None | SRR26399239 | Sensitive | lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None |
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