Rv3596c - c.210C>T


Drug resistance types
55 Sensitive 1 RR-TB 6 HR-TB 4 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 21 Other
lineage Counts
lineage Count
lineage4.9 45
lineage2.1;lineage4.9;lineage6.3 1
lineage4.2.1.1;lineage4.3.3 1
lineage4.3.3 1
lineage4.1.2.1 2
lineage2.2.1;lineage4 2
La1.7;lineage4.9 5
lineage3 2
lineage2.2.1 5
lineage4 1
lineage1.1.1;lineage4 1
La1.7;M.canetti;lineage4.9 4
lineage4.1.1.3;lineage4.9 2
lineage1;lineage4.9 1
La1.7;lineage4.9;lineage6 1
lineage4.4.1.1.1 1
lineage2;lineage4.9 1
La1.7.1 1
La1.7 1
lineage4.8 1
M.canetti;lineage4.9 1
lineage5.1.4 1
lineage4.5 1
lineage4.1;lineage4.9 1
lineage4.4.1.1 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage2.2.1;lineage4.9 1
1
spoligotype Counts
spoligotype Count
None 87
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045217 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1180250 Other lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR12708409 HR-TB lineage4.3.3 None
SRR3675580 Sensitive lineage4.9 None
ERR400320 Sensitive lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR3675455 Sensitive lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR400345 Other lineage4.9 None
ERR4816470 HR-TB lineage3 None
ERR400326 Other lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR400336 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4 None
SRR3675541 Sensitive lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR1181402 Sensitive lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
SRR9971114 Other lineage2.2.1 None
SRR3675385 Other La1.7;lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR1180300 Sensitive lineage4.9 None
SRR3675522 Other lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR6045548 Sensitive lineage4.9 None
ERR4830353 Other La1.7 None
SRR3675267 Other La1.7;lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR1180420 Sensitive lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
SRR6046245 Other lineage4.9 None
ERR2514552 Sensitive lineage3 None
SRR6045399 Other M.canetti;lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR9971270 RR-TB lineage2.2.1 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
SRR1180391 Sensitive lineage4.9 None
SRR12708384 Sensitive lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR3675210 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR1181283 Sensitive lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR12708416 Sensitive None
ERR4797313 Sensitive lineage2.2.1 None
SRR1180355 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR3675477 Sensitive lineage4.9 None