Rv0001 - c.714C>T
Drug resistance types
29 Sensitive
0 RR-TB
2 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
12 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage5.1.4 | 1 |
| lineage4.3.3 | 2 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.2.1 | 1 |
| lineage4.9 | 24 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| lineage1.1.1.1;lineage2.2.1 | 1 |
| lineage2.2.1 | 3 |
| lineage1;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage1.1.1.1 | 4 |
| 1 | |
| lineage4.5 | 1 |
| lineage4.1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 46 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR1175496 | Sensitive | lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR12708384 | Sensitive | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR11662693 | Pre-XDR-TB | lineage1.1.1.1;lineage2.2.1 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR3675477 | Sensitive | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR22251665 | Sensitive | lineage1.1.1.1 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | SRR12708416 | Sensitive | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR30182647 | Sensitive | lineage1.1.1.1 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR26399488 | Sensitive | lineage1.1.1.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR11662433 | MDR-TB | lineage1.1.1.1 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None |
|---|
