EBG00000313339 - n.172G>C
Drug resistance types
87 Sensitive
2 RR-TB
51 HR-TB
6 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
47 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.1.1 | 1 |
| lineage2.2.1 | 8 |
| lineage4.3.3 | 1 |
| 32 | |
| lineage4.3.4.1 | 1 |
| lineage4.1.2.1 | 7 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2 | 2 |
| lineage4.9 | 58 |
| lineage4 | 66 |
| La1.8.1 | 1 |
| lineage4.2.2 | 1 |
| lineage4.5 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.3.4 | 1 |
| La1.7.1 | 1 |
| lineage4.1 | 1 |
| lineage4;lineage2.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.1.1 | 1 |
| lineage2.1 | 1 |
| lineage3 | 2 |
| lineage4.3.2.1 | 2 |
| lineage4.2.1 | 2 |
| lineage5.1.4 | 1 |
| lineage1.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 196 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4831716 | HR-TB | lineage1.1.1.1 | None | ERR4831839 | MDR-TB | lineage2.2.1 | None | SRR6785315 | Sensitive | lineage4.3.3 | None | ERR323045 | HR-TB | None | ERR502943 | HR-TB | None | SRR8217918 | HR-TB | None | SRR9971114 | Other | lineage2.2.1 | None | ERR11465279 | Sensitive | lineage4.3.4.1 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR1063857 | HR-TB | None | ERR11465235 | Sensitive | lineage4.3.4.2.1 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR349265 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363426 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR373945 | HR-TB | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797019 | Other | La1.8.1 | None | ERR400345 | Other | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4769521 | HR-TB | None | ERR4188247 | HR-TB | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4831848 | HR-TB | lineage4.2.2 | vn | ERR4798431 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811030 | Sensitive | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR4812155 | Sensitive | None | ERR6865502 | Sensitive | lineage4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736848 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | ERR9119669 | HR-TB | None | ERR970413 | MDR-TB | lineage2.2.1 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR16157123 | Other | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR8692881 | Other | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR8692879 | HR-TB | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR8692790 | RR-TB | lineage4 | None | SRR8692812 | Other | lineage4.9 | None | SRR8692771 | Other | lineage4.9 | None | SRR8692893 | Other | lineage4.9 | None | SRR8692905 | HR-TB | None | SRR8692882 | HR-TB | lineage4.9 | None | SRR8692782 | Other | lineage4.9 | None | SRR8692818 | Other | lineage4.9 | None | SRR8692825 | Other | lineage4.9 | None | SRR8692800 | Other | lineage4 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692878 | Other | lineage4.9 | None | SRR8692776 | Other | lineage4.9 | None | SRR8692894 | Other | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR8692832 | Other | lineage4.9 | None | SRR8692887 | Other | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR176779 | HR-TB | None | SRR8692791 | Other | lineage4.9 | None | SRR8692844 | Other | lineage4.9 | None | SRR8692867 | Other | lineage4.9 | None | SRR8692899 | Other | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | None | SRR3675477 | Other | lineage4.9 | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | ERR3275450 | Other | lineage4 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675279 | Other | None | SRR3675387 | Sensitive | None | SRR3675292 | Sensitive | lineage4 | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675318 | Other | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675522 | Other | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR212138 | HR-TB | lineage4 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4816291 | Sensitive | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR4817998 | Other | lineage3 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4818811 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4819051 | Other | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | ERR4820719 | Other | lineage1.2.2.2 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341432 | HR-TB | lineage4 | None | ERR2514552 | Sensitive | lineage3 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR6045503 | HR-TB | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR4820043 | Sensitive | lineage4.1.2.1 | None | ERR2517475 | Other | lineage4 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR2693227 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6046802 | Other | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6045033 | HR-TB | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046245 | Other | lineage4.9 | None | ERR4831638 | Sensitive | None | SRR6046897 | Sensitive | lineage4 | None |
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