EBG00000313325 - n.1237G>A
Drug resistance types
202 Sensitive
18 RR-TB
16 HR-TB
18 MDR-TB
12 Pre-XDR-TB
0 XDR-TB
102 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 54 |
| La1.8.1 | 11 |
| lineage2.2.1 | 34 |
| lineage4.9 | 77 |
| lineage4.1.2.1 | 12 |
| lineage5.1.2 | 1 |
| lineage4.3.4.1 | 4 |
| lineage4.9;La1.8 | 1 |
| lineage4.1.1.3 | 8 |
| La1.3 | 8 |
| lineage4.9;La1.3 | 3 |
| 15 | |
| lineage4.1.2 | 10 |
| lineage3.1.2.1 | 1 |
| lineage4.5 | 2 |
| lineage4.3.4.2.1 | 12 |
| lineage4.8 | 11 |
| lineage3 | 12 |
| La1.2 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4.6.1 | 3 |
| lineage4.2.2.1 | 1 |
| lineage4.6 | 1 |
| lineage4.9;lineage4.3.4.1 | 1 |
| La1.7.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.1.1 | 9 |
| lineage4.1.2;lineage3.1 | 2 |
| lineage4.4.1.1 | 9 |
| lineage2.2.1.1 | 3 |
| lineage1.1.3.2 | 2 |
| lineage1.1.3 | 1 |
| lineage4.3.3 | 9 |
| lineage4.1 | 3 |
| lineage1.2.2.2 | 1 |
| lineage3.1.1 | 3 |
| lineage1.2.2.1 | 2 |
| lineage4.3 | 2 |
| lineage4.3.2.1 | 13 |
| lineage4.2.1 | 2 |
| lineage5.1.4 | 1 |
| lineage4.4.1.1.1 | 2 |
| La3 | 1 |
| lineage5.1.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.5;lineage2.2 | 1 |
| lineage4.4.2;lineage2.2.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage2.2 | 2 |
| lineage4.4 | 1 |
| lineage1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.7 | 2 |
| lineage4.3.4.2 | 1 |
| lineage3.1.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 368 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR349265 | Sensitive | lineage4 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR349264 | Sensitive | lineage4 | None | ERR3335798 | MDR-TB | lineage2.2.1 | None | ERR349296 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349299 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR373947 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR3804154 | Sensitive | lineage4.1.2.1 | None | ERR400345 | Other | lineage4 | None | ERR4627392 | Other | La1.8.1 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4188010 | Other | La1.8.1 | None | ERR4188253 | Other | La1.8.1 | None | ERR4178135 | Sensitive | lineage4.3.4.1 | None | ERR4188255 | Other | lineage4.9;La1.8 | None | ERR4627379 | Other | La1.8.1 | None | ERR473341 | Sensitive | lineage4.1.1.3 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769404 | Other | La1.3 | None | ERR4769408 | Other | La1.3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR4769507 | Sensitive | lineage4.9 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR4769551 | Other | La1.3 | None | ERR4769547 | Sensitive | lineage4.9;La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4798431 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR4831850 | HR-TB | lineage4.1.2 | vn | ERR5865343 | MDR-TB | lineage2.2.1 | None | ERR4798898 | MDR-TB | lineage3.1.2.1 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4812155 | Sensitive | None | ERR2515916 | Sensitive | lineage4.3.4.2.1 | za | ERR4811030 | Sensitive | None | ERR2515460 | Sensitive | lineage4.8 | za | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | ERR6201802 | Other | La1.2 | None | ERR8025347 | Sensitive | lineage4.9 | None | ERR6865839 | Sensitive | lineage4.3.4.1 | None | ERR9786447 | Sensitive | lineage4.1.2.1 | None | SRR1169167 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR10482948 | Other | La1.8.1 | None | SRR1172808 | Other | lineage4.9 | None | SRR1172306 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1169203 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1169301 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1180252 | Other | lineage4.9 | None | SRR1173025 | Other | lineage4.9 | None | SRR1173717 | MDR-TB | lineage4.6.1 | None | SRR1173720 | Other | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR1173190 | Sensitive | lineage4.9 | None | SRR1173361 | MDR-TB | lineage4.6.1 | None | SRR1173416 | Other | lineage4.9 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR1180982 | Other | lineage2.2.1 | None | SRR13180204 | Sensitive | lineage3 | None | SRR1181161 | Other | lineage4.9 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR1181250 | Other | lineage4.9 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | SRR1184383 | Other | lineage4.9 | None | SRR1196582 | Other | lineage4.9 | None | SRR11972420 | MDR-TB | lineage2.2.1 | None | SRR11972447 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR13180203 | Sensitive | lineage4.2.2.1 | None | SRR13180205 | Sensitive | lineage4.1.2.1 | None | SRR13180322 | Sensitive | lineage4.6 | None | SRR13591410 | Other | lineage4.9;lineage4.3.4.1 | None | SRR13199734 | Other | La1.2 | None | SRR13861519 | Other | lineage4.9 | None | SRR13861534 | Other | lineage4.9 | None | SRR13861589 | RR-TB | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR18391772 | Other | La1.7.1 | None | SRR17856664 | Sensitive | lineage3 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR2101595 | RR-TB | lineage4.3.4.2.1 | None | SRR2101505 | MDR-TB | lineage4.9.1 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR2101625 | Other | lineage4.1.2;lineage3.1 | None | SRR2101647 | Sensitive | lineage4.9 | None | SRR2101637 | RR-TB | lineage4.4.1.1 | None | SRR2101684 | Other | lineage2.2.1.1 | None | SRR2101666 | Sensitive | lineage4.8 | None | SRR2101691 | Other | lineage2.2.1 | None | SRR2101643 | Other | lineage2.2.1 | None | SRR2101663 | Other | lineage1.1.3.2 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR2101689 | Other | lineage4.3.4.1 | None | SRR2101693 | Sensitive | lineage4.1.2 | None | SRR2101711 | Sensitive | lineage2.2.1 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR2101773 | Sensitive | lineage4.3.4.2.1 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | SRR2101730 | Sensitive | lineage4.1.1 | None | SRR21711124 | Other | lineage1.1.3 | None | SRR2101827 | Sensitive | lineage4.3.4.2.1 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR21685367 | MDR-TB | lineage2.2.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR21737226 | Sensitive | lineage4.5 | None | SRR21764246 | Other | lineage4.9 | None | SRR21714045 | HR-TB | lineage2.2.1 | None | SRR21728339 | Other | lineage3 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3105736 | Other | lineage1.2.2.2 | None | SRR3675477 | Other | lineage4.9 | None | ERR4815607 | Other | lineage4.1.2.1 | None | ERR4815632 | Sensitive | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | SAMN02567676 | MDR-TB | lineage4.6.1 | None | ERR3275450 | Other | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | ERR2179857 | RR-TB | lineage4 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675279 | Other | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | ERR4815556 | RR-TB | lineage3 | None | ERR2229033 | Other | lineage4.8 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675387 | Sensitive | None | SRR3675522 | Other | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4816101 | Other | lineage4.1.2.1 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR216901 | Other | lineage3.1.1 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR4817069 | RR-TB | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR126607 | Sensitive | lineage1.2.2.1 | mw | ERR2229358 | Other | lineage4.8 | None | ERR176820 | Sensitive | lineage4.3.4.2.1 | mw | ERR2228859 | RR-TB | lineage4 | None | ERR4817263 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR228175 | Sensitive | lineage3 | None | ERR4817998 | Other | lineage3 | None | ERR228180 | Sensitive | lineage3 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR4818811 | Pre-XDR-TB | lineage2.2.1 | None | ERR2515721 | Sensitive | lineage4.3.2.1 | None | ERR2512770 | Other | lineage4.2.1 | None | SRR2100537 | Sensitive | lineage3 | None | SRR5341375 | Other | lineage4.9 | None | ERR2515484 | Other | lineage4.8 | None | SRR5341417 | Pre-XDR-TB | lineage3 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR2100532 | Sensitive | lineage3 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR5341396 | Other | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR2101659 | Other | lineage4.4.1.1.1 | None | SRR2101636 | Other | lineage4.3.2.1 | None | ERR2515854 | Sensitive | lineage2.2.1 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR2101709 | Sensitive | lineage4.1.1.3 | None | SRR2101661 | Sensitive | lineage4.1 | None | SRR5341323 | Sensitive | lineage4 | None | ERR4819952 | Sensitive | La3 | None | ERR2446382 | Other | lineage4 | None | ERR2515230 | Sensitive | lineage4.8 | None | ERR2515148 | Sensitive | lineage4.3.3 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR702399 | Sensitive | lineage5.1.1 | gh | ERR2517475 | Other | lineage4 | None | SRR6045503 | HR-TB | None | ERR2660490 | Sensitive | lineage4.3.2.1 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045205 | Sensitive | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | ERR2851371 | Other | lineage4.9 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046802 | Other | lineage4 | None | SRR6046245 | Other | lineage4.9 | None | SRR6152986 | Other | lineage2.2.1 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6397441 | Other | lineage4 | None | SRR6397642 | RR-TB | None | SRR6397406 | Other | lineage4.1.2.1 | None | ERR502472 | Other | lineage4.6.2.2 | None | SRR6397771 | Other | lineage1.1.1.1 | None | SRR6982078 | Sensitive | None | ERR502482 | Sensitive | lineage4.9 | None | ERR4832067 | MDR-TB | lineage2.2.1.1 | None | ERR502483 | Sensitive | lineage4.9 | None | ERR502489 | Sensitive | lineage4.9 | None | ERR502484 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | None | ERR502485 | Sensitive | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR502490 | Sensitive | lineage4.9 | None | SRR6856087 | Sensitive | lineage4 | None | ERR502492 | Sensitive | lineage4.9 | None | ERR502497 | Sensitive | lineage4.9 | None | ERR4831763 | HR-TB | lineage4.5;lineage2.2 | None | ERR502493 | Sensitive | lineage4.9 | None | ERR502498 | Sensitive | lineage4.9 | None | ERR4831839 | MDR-TB | lineage2.2.1 | None | ERR4831841 | HR-TB | lineage4.4.2;lineage2.2.1 | None | SRR6982090 | RR-TB | lineage4.4.1.1 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6856094 | Other | lineage2.2.1 | None | SRR6982088 | Other | lineage4.1.1.2 | None | SRR6982092 | Other | lineage4.3.2.1 | None | SRR6896162 | Sensitive | lineage4.9 | None | SRR6982102 | Other | lineage2.2.1 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | SRR6982106 | Sensitive | lineage4.8 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6982105 | Sensitive | lineage2.2.1.1 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR6982140 | Other | lineage2.2 | None | SRR6982146 | Sensitive | lineage4.1.1.3 | None | SRR6982148 | Sensitive | lineage2.2.1 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR6896340 | HR-TB | lineage4.4.1.1 | None | SRR6982170 | Sensitive | lineage4.1 | None | SRR6982430 | Other | lineage4.3.4.2.1 | None | SRR6896348 | Sensitive | lineage4.1.2.1 | None | SRR6982175 | Other | lineage1.1.3.2 | None | SRR6982195 | RR-TB | lineage4.4 | None | SRR6982190 | Sensitive | lineage4.3.3 | None | SRR6982227 | Other | lineage4.1.1 | None | SRR6982427 | Sensitive | lineage4.1.1 | None | SRR6982196 | Sensitive | None | SRR6982198 | HR-TB | lineage1 | None | SRR6982205 | Sensitive | lineage1.2.2.1 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | SRR6982328 | HR-TB | lineage3.1.1 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR6982292 | Other | lineage4.4.1.1.1 | None | SRR6982494 | Other | lineage2.2.2 | None | SRR6982275 | Other | lineage2.2.1 | None | SRR6982313 | Sensitive | lineage4.3.4.2.1 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | SRR6982334 | Sensitive | lineage4.4.1.1 | None | SRR6982332 | Sensitive | lineage4.4.1.1 | None | SRR6982337 | Sensitive | lineage4.7 | None | SRR6855718 | Sensitive | lineage4.8 | None | SRR6855695 | Sensitive | lineage4.8 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6982363 | Sensitive | lineage4.3.3 | None | SRR6981941 | Sensitive | lineage4.3.4.2.1 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR6981939 | Sensitive | lineage4.3.4.2.1 | None | SRR6981966 | Other | lineage2.2.1 | None | SRR6981968 | Sensitive | lineage4.1.2 | None | SRR6981978 | Sensitive | lineage4.3.4.2.1 | None | SRR6981975 | Sensitive | lineage4.7 | None | SRR6981981 | Other | lineage4.3.3 | None | SRR6981997 | Sensitive | lineage4.9 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6855851 | Sensitive | lineage4.3.4.2.1 | None | SRR6982014 | Other | lineage4.1.1 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6982011 | Other | lineage4.1.1 | None | SRR6982389 | Other | lineage4.1.2;lineage3.1 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6982026 | Sensitive | lineage4.3.3 | None | SRR6855917 | Other | lineage4.8 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6982043 | Sensitive | lineage4.4.1.1 | None | SRR6855963 | RR-TB | lineage2.2.1 | None | SRR6982398 | MDR-TB | lineage2.2 | None | SRR6982048 | HR-TB | lineage4.3.2.1 | None | SRR6982050 | Sensitive | lineage4.3.4.1 | None | SRR6855967 | Sensitive | lineage4.1.2 | None | SRR6982405 | Sensitive | None | SRR6982058 | HR-TB | lineage2.2.1 | None | SRR6982064 | Sensitive | lineage4.1.1 | None | SRR6982075 | Sensitive | lineage3 | None | SRR6982057 | Pre-XDR-TB | lineage4.3 | None | SRR6982056 | Sensitive | lineage4.3.4.2.1 | None | SRR6982484 | Sensitive | lineage3.1.1 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR6982077 | MDR-TB | lineage4.3.2.1 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | ERR5087606 | Other | La1.8.1 | None | ERR502943 | HR-TB | None | ERR5087562 | Other | La1.8.1 | None | ERR5311080 | Other | La1.8.1 | None | ERR5162118 | Other | La1.8.1 | None | ERR5162133 | Other | La1.8.1 | None | SRR7645834 | Other | lineage2.2.1 | None | SRR6982509 | Sensitive | lineage4.3.2.1 | None | SRR6982514 | Sensitive | lineage4.3.3 | None | SRR6982558 | Other | lineage4.3.4.2 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None |
|---|
