Rv1630 - c.144G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
126 Sensitive
21 RR-TB
28 HR-TB
17 MDR-TB
5 Pre-XDR-TB
1 XDR-TB
54 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 4 |
| lineage5.1.4 | 1 |
| lineage4.9 | 153 |
| La1.7;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage2.2.1 | 17 |
| lineage4.3.4.2.1 | 2 |
| lineage4 | 5 |
| lineage2.2.1;lineage4 | 2 |
| lineage4.8 | 5 |
| lineage4.1.2.1 | 5 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.4.1.1 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage2.2.2 | 2 |
| lineage4.6.1.2 | 5 |
| lineage4.2.2.2 | 2 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage1.1.1;lineage4 | 1 |
| La1.2.BCG | 2 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.3.2.1 | 2 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.3.3 | 4 |
| lineage4.1.1.3 | 3 |
| lineage4.4.1.2 | 1 |
| La1.2.BCG;lineage4.9 | 1 |
| lineage4.2.1 | 2 |
| lineage2.2.1;lineage4.9 | 2 |
| 1 | |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4.5 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage4.6.1.1 | 2 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4.1.1.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.3 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.8.1 | 1 |
| La1.8.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 252 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1062918 | Other | lineage3 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | SRR1175474 | Other | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR3797029 | Other | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR3675265 | Other | lineage4 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR363437 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR11662694 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR6359069 | Sensitive | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | ERR2514552 | Sensitive | lineage3 | None | ERR926163 | Other | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR3675247 | Other | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR3675477 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR4815471 | Sensitive | lineage4.9 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR3675279 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1180148 | Sensitive | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR6865502 | Sensitive | lineage4 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR4819933 | Sensitive | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR1915481 | Other | La1.2.BCG;lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR12708416 | Sensitive | None | ERR349296 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR4818536 | Other | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR6045503 | Sensitive | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR1181403 | Other | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR502474 | RR-TB | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR12708384 | Sensitive | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR926160 | Sensitive | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR363474 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR11342636 | MDR-TB | lineage4.3.3;lineage4.9 | None | SRR6046802 | Other | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR867542 | HR-TB | lineage4.3 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675387 | Other | lineage4.9 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR7240033 | Other | La1.8.1 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR6044835 | Other | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1915485 | Other | La1.2.BCG | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1180413 | Sensitive | lineage4.9 | None |
|---|
