TB-Profiler
Home
Upload
SRA data
Rv0668
- c.1642_1644delAGCinsTCG
Drug resistance types
78 Sensitive
2 RR-TB
23 HR-TB
6 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
30 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
98
lineage2.2.1
8
lineage4
5
lineage4.1.2.1
3
lineage4.8;lineage4.9
2
lineage1;lineage4.9
2
lineage2.2.1;lineage4
2
La1.7.1;lineage4.9
1
lineage1.1.3.1
1
La1;lineage4.1.2
1
Showing 1 to 10 of 27 entries
Previous
1
2
3
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
140
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1063839
MDR-TB
La2;lineage2.2
None
ERR1063849
HR-TB
lineage4.9
None
ERR1063857
MDR-TB
La2;lineage4.9
None
ERR1063858
HR-TB
lineage4.9
None
ERR1063859
HR-TB
La1.7.1;lineage4.9
None
ERR1063862
HR-TB
lineage4.9
None
ERR124636
Sensitive
lineage4.9
None
ERR13265833
Other
lineage4.9
None
ERR176651
Other
lineage4.9
None
ERR176778
HR-TB
lineage4.9
None
Showing 1 to 10 of 140 entries
Previous
1
2
3
4
5
…
14
Next