Rv3596c - c.1416T>C
Drug resistance types
43 Sensitive
5 RR-TB
67 HR-TB
19 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 11 |
| lineage4.9 | 51 |
| lineage4 | 16 |
| 48 | |
| La1.8.1 | 2 |
| lineage1.1.2 | 1 |
| La1.3 | 2 |
| lineage2.2.1 | 9 |
| lineage4.5 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.8 | 1 |
| lineage4.2.2 | 10 |
| lineage4.1 | 3 |
| lineage4.2;La1.7 | 1 |
| lineage4.3.3 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.2.1 | 1 |
| lineage3 | 3 |
| lineage5.1.4 | 1 |
| lineage2.2.1.1 | 1 |
| lineage1.1 | 1 |
| lineage1.1.3 | 1 |
| lineage2.2 | 1 |
| lineage3.1 | 2 |
| lineage4.8.1 | 1 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 174 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR10796569 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4 | None | ERR3283017 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR4821179 | Other | lineage4.1.2.1 | gb | ERR3468544 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR400320 | Sensitive | lineage4 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797083 | HR-TB | None | ERR400326 | Sensitive | lineage4 | None | ERR4596906 | Sensitive | lineage1.1.2 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4188247 | HR-TB | None | ERR4188350 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769552 | Other | La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR6358837 | HR-TB | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR6358951 | HR-TB | lineage4 | None | ERR736848 | HR-TB | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR8976043 | HR-TB | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR13837631 | Sensitive | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR13837630 | Sensitive | lineage4.9 | None | SRR13837637 | Sensitive | lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR13861153 | Other | lineage4.9 | None | SRR13861332 | Other | lineage4.9 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861397 | HR-TB | lineage4.9 | None | SRR13861424 | RR-TB | lineage4.9 | None | SRR13861564 | Sensitive | lineage4.9 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR13861553 | Sensitive | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR13861671 | Sensitive | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20632784 | MDR-TB | lineage4.2.2 | None | SRR20969422 | MDR-TB | lineage4.2.2 | None | SRR20632792 | MDR-TB | lineage4.2.2 | None | DRR261129 | Sensitive | lineage4.2.2 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | DRR261022 | Sensitive | lineage4.2.2 | None | DRR261041 | Sensitive | lineage4.2.2 | None | DRR261103 | Sensitive | lineage4.2.2 | None | SRR8692807 | Other | lineage4.9 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR21887716 | MDR-TB | lineage4.2.2 | None | SRR8692899 | Other | lineage4.9 | None | SRR8692782 | Other | lineage4.9 | None | SRR8692887 | Other | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR25206862 | MDR-TB | lineage4.2.2 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR4813861 | Other | lineage4.3.3 | None | SRR3675477 | Other | lineage4.9 | None | ERR161033 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675488 | HR-TB | None | SRR3675486 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675222 | Other | None | SRR3675247 | Other | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | SRR3675522 | Other | None | SRR3675279 | Other | None | SRR3675318 | Other | lineage4.9 | None | SRR3675383 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675501 | HR-TB | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR1950064 | Other | lineage4 | None | SRR3675545 | HR-TB | None | SRR3675542 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675558 | HR-TB | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4816466 | HR-TB | None | ERR2509673 | Other | lineage2.2.1 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR3275196 | Other | lineage2.2.1 | nl | SRR5341396 | Other | lineage4 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2693239 | HR-TB | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR4821053 | Other | lineage3 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341323 | Sensitive | lineage4 | None | SRR6045519 | HR-TB | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6046015 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6325442 | HR-TB | None | ERR278594 | HR-TB | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | ERR4828298 | Sensitive | lineage4.9 | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | SRR8651657 | MDR-TB | lineage4.2.2 | cn | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR323036 | HR-TB | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4831638 | Sensitive | None | SRR6650405 | Sensitive | lineage1.1.3 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR294248 | HR-TB | None | ERR502943 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR323041 | HR-TB | None | ERR323063 | HR-TB | None | ERR323038 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None |
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