Rv3596c - c.1416T>C


Drug resistance types
37 Sensitive 14 RR-TB 58 HR-TB 47 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 43 Other
lineage Counts
lineage Count
M.canetti;lineage4.9 3
lineage4.9 53
M.canetti;lineage2.1;lineage4.9 24
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage4.2.2 11
lineage2.1;lineage2.2;lineage6.3 1
lineage2.2.1 9
M.canetti;lineage2.1 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage2.1;lineage4.1.1.1;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
La1.7.1 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
2
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.3.4.2.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage4.5 1
La3;M.canetti;lineage2.1;lineage4.9 12
M.canetti;lineage4.9;lineage9 1
M.canetti;lineage2.1;lineage4 1
lineage4.2;lineage4.6.3;lineage4.9.1 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.7;lineage4.9 3
lineage3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.2.2;lineage6.2 2
M.canetti;lineage2.1;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage4.1.2.1 6
lineage4.1.1.3;lineage4.9 1
La1.7;M.canetti;lineage4.9 1
lineage1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.9 2
lineage4.2.1.1;lineage4.3.3 1
lineage2.2.1;lineage4 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage4.1.1.3 2
lineage4.8 1
lineage2.1;lineage4.9 5
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.1.2.1.1 1
La1.7;lineage4.2 1
lineage4.9;lineage6.3 1
lineage2.2.1.1 1
lineage4.3.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
lineage1.1.1;lineage4 1
La3;M.canetti;lineage3.1 1
lineage5.1.4 1
M.canetti;lineage2.1;lineage3 1
lineage1.1.3 1
La3;M.canetti;lineage4.8;lineage4.9 1
La1.8.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage2.1;lineage4.3.2 1
lineage4.8.1 1
La1.2;La1.8.1 1
M.canetti;lineage2.1;lineage4.1.2.1 1
spoligotype Counts
spoligotype Count
None 199
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675494 RR-TB lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR20632792 MDR-TB lineage4.2.2 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR26399265 Other lineage2.2.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR4800527 MDR-TB lineage2.2.1 None
SRR20969422 MDR-TB lineage4.2.2 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675487 Other M.canetti;lineage4.9 None
SRR7240492 HR-TB La1.7.1 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR1640750 Other None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR13861510 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4811030 Sensitive lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR400320 Sensitive lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
SRR25206862 MDR-TB lineage4.2.2 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675501 Other La1.7;lineage4.9 None
ERR4821053 RR-TB lineage3 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR6359066 HR-TB lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR926160 Sensitive lineage4.9 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675461 RR-TB lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
DRR261022 Sensitive lineage4.2.2 None
ERR400326 Other lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
DRR261129 Sensitive lineage4.2.2 None
SRR6046564 Sensitive lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR8651657 MDR-TB lineage4.2.2 cn
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR29050859 Other lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
DRR261041 Sensitive lineage4.2.2 None
SRR21887716 MDR-TB lineage4.2.2 None
ERR2509673 Other lineage2.2.1 None
ERR4797313 Sensitive lineage2.2.1 None
SRR1162864 Other lineage4.1.2.1 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR926165 Sensitive lineage4.9 None
SRR3675243 Other lineage4.9 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR926157 Sensitive lineage4.9 None
SRR20632784 MDR-TB lineage4.2.2 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3468607 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4821179 Other lineage4.1.2.1 gb
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR3797083 RR-TB lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR2693228 RR-TB lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR27069416 MDR-TB lineage4.2.2 None
ERR736848 Other lineage4.9 None
SRR3675269 RR-TB lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675267 Other La1.7;lineage4.9 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR1063855 Other lineage4.9 None
SRR13861381 HR-TB lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR3468544 Other lineage2.1;lineage4.9 None
SRR8692887 Other None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR400336 Sensitive lineage4.9 None
SRR5709967 MDR-TB lineage2.2.1 None
ERR926163 Other lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR13861528 HR-TB lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR6358951 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4812155 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR926164 Other lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR13861332 Other lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR4813861 Other lineage4.3.3 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR2513283 Sensitive lineage5.1.4 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR13861553 Other lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4769442 Sensitive lineage4.9 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR926156 Sensitive lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6650405 Sensitive lineage1.1.3 None
SRR3675477 Sensitive lineage4.9 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3275196 Other lineage2.2.1 nl
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR1166821 Other lineage4.1.2.1 None
ERR926162 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
SRR13861564 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR5917710 Other lineage4.1.2.1 None
ERR926161 Sensitive lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
DRR261103 Sensitive lineage4.2.2 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675541 Sensitive lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675441 Other lineage4.9 None