Rv3457c - c.127C>T
Drug resistance types
112 Sensitive
12 RR-TB
1 HR-TB
11 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2 | 98 |
| M.canetti;lineage4.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| lineage4 | 3 |
| lineage4.6.4;lineage4.9 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.9 | 17 |
| lineage4.1.2.1 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage1.2.2.1;lineage4.1.2 | 4 |
| 1 | |
| lineage2.2.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage5.1.4 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage1.2.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage4.3.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 154 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR4033091 | Sensitive | lineage4.1.2 | za | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR4033594 | Sensitive | lineage4.1.2 | za | SRR4033592 | Sensitive | lineage4.1.2 | None | SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR4033575 | Sensitive | lineage4.1.2 | za | SRR4033593 | Sensitive | lineage4.1.2 | za | SRR1182994 | Sensitive | lineage4.1.2 | None | ERR7911217 | RR-TB | lineage4.1.2 | za | ERR2517475 | Other | lineage4 | None | ERR4188322 | Other | lineage4.6.4;lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR2101389 | Sensitive | lineage4.1.2 | None | SAMN02350451 | Sensitive | lineage4.1.2 | za | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR4033596 | Sensitive | lineage4.1.2 | za | SRR28868883 | Sensitive | lineage4.1.2 | None | SRR4033090 | Sensitive | lineage4.1.2 | None | SRR4033141 | Sensitive | lineage4.1.2 | za | SRR4033097 | Sensitive | lineage4.1.2 | za | SRR6982385 | Sensitive | lineage4.1.2 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR4033108 | Sensitive | lineage4.1.2 | za | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR4033151 | Sensitive | lineage4.1.2 | za | ERR3275450 | Other | lineage4 | None | SRR4033574 | Sensitive | lineage4.1.2 | za | SRR4033567 | Sensitive | lineage4.1.2 | za | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | SRR4033150 | Sensitive | lineage4.1.2 | za | SRR4033563 | Sensitive | lineage4.1.2 | None | SRR4033565 | Sensitive | lineage4.1.2 | za | SRR1183065 | Sensitive | lineage1.2.2.1;lineage4.1.2 | None | SRR4033102 | Sensitive | lineage4.1.2 | za | SRR4033584 | Sensitive | lineage4.1.2 | za | SRR4033135 | Sensitive | lineage4.1.2 | za | ERR400326 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR4033559 | Sensitive | lineage4.1.2 | za | SRR1140925 | Sensitive | lineage4.1.2 | None | ERR2446382 | Other | lineage4 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR4033579 | Sensitive | lineage4.1.2 | za | SRR4033583 | Sensitive | lineage4.1.2 | za | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR1181127 | Sensitive | lineage1.2.2.1;lineage4.1.2 | None | SRR4033147 | Sensitive | lineage4.1.2 | None | SRR11342659 | RR-TB | lineage4.1.2 | None | SRR4033103 | Sensitive | lineage4.1.2 | None | ERR7737923 | RR-TB | lineage4.1.2 | None | SRR4033580 | Sensitive | lineage4.1.2 | None | SRR12708416 | Sensitive | None | SRR4033581 | Sensitive | lineage4.1.2 | za | SRR4033585 | Sensitive | lineage4.1.2 | za | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR1181314 | Sensitive | lineage1.2.2.1;lineage4.1.2 | None | SRR4033140 | Sensitive | lineage4.1.2 | za | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR4033570 | Sensitive | lineage4.1.2 | za | SRR4033589 | Sensitive | lineage4.1.2 | za | SRR4033096 | Sensitive | lineage4.1.2 | za | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR11349193 | RR-TB | lineage4.1.2 | None | SRR4033586 | Sensitive | lineage4.1.2 | za | SRR4033092 | Sensitive | lineage4.1.2 | za | ERR2515896 | Sensitive | lineage4.1.2 | za | ERR400320 | Sensitive | lineage4.9 | None | ERR4809355 | MDR-TB | lineage4.1.2 | za | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR4033558 | Sensitive | lineage4.1.2 | za | SRR4033569 | Sensitive | lineage4.1.2 | za | SRR4033139 | Sensitive | lineage4.1.2 | za | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR9971293 | Sensitive | lineage4.1.2 | None | SRR6855954 | Sensitive | lineage4.1.2 | None | SRR4033095 | Sensitive | lineage4.1.2 | za | SRR4033144 | Sensitive | lineage4.1.2 | None | SRR4033561 | Sensitive | lineage4.1.2 | za | SRR3675279 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR4033138 | Sensitive | lineage4.1.2 | za | SRR4033127 | Sensitive | lineage4.1.2 | za | SRR4033094 | Sensitive | lineage4.1.2 | za | SRR4033572 | Sensitive | lineage4.1.2 | za | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR10315694 | RR-TB | lineage4.1.2 | None | SRR4033142 | Sensitive | lineage4.1.2 | za | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR4033556 | Sensitive | lineage4.1.2 | za | SRR6044819 | Sensitive | lineage4.9 | None | SRR4033568 | Sensitive | lineage4.1.2 | za | SRR4033590 | Sensitive | lineage4.1.2 | za | SRR4033106 | Sensitive | lineage4.1.2 | za | SRR4033573 | Sensitive | lineage4.1.2 | za | SRR4033587 | Sensitive | lineage4.1.2 | za | SRR4033149 | Sensitive | lineage4.1.2 | None | SRR4033582 | Sensitive | lineage4.1.2 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR2515285 | Sensitive | lineage4.1.2 | za | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR4033560 | Sensitive | lineage4.1.2 | za | ERR8975540 | Sensitive | lineage4.1.2 | None | SRR4033125 | Sensitive | lineage4.1.2 | za | SRR10686529 | MDR-TB | lineage4.1.2 | None | SRR3675502 | Sensitive | lineage4.9 | None | SRR4033132 | Sensitive | lineage4.1.2 | za | SRR4033564 | Sensitive | lineage4.1.2 | za | SRR4033578 | Sensitive | lineage4.1.2 | za | SRR9971232 | RR-TB | lineage4.1.2 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR6896246 | Sensitive | lineage4.1.2 | None | SRR4033591 | Sensitive | lineage4.1.2 | za | ERR4811031 | Sensitive | lineage4.5 | None | SRR4033562 | Sensitive | lineage4.1.2 | za | SRR4033557 | Sensitive | lineage4.1.2 | za | SRR4033553 | Sensitive | lineage4.1.2 | za | SRR4033576 | Sensitive | lineage4.1.2 | za | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | SRR1180271 | Sensitive | lineage1.2.2.1;lineage4.1.2 | None | SRR11349206 | RR-TB | lineage4.1.2 | None | SRR3675522 | Other | lineage4.9 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR4033136 | Sensitive | lineage4.1.2 | za | SRR4033099 | Sensitive | lineage4.1.2 | za | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR1019125 | Sensitive | lineage4.1.2 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR4033146 | Sensitive | lineage4.1.2 | None | SRR4033554 | Sensitive | lineage4.1.2 | za | SRR3675446 | RR-TB | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR4033598 | Sensitive | lineage4.1.2 | za | SRR4033597 | Sensitive | lineage4.1.2 | za | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR6855723 | Sensitive | lineage4.1.2 | None | SRR3675387 | Other | lineage4.9 | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | SRR4033571 | Sensitive | lineage4.1.2 | za | SRR4033137 | Sensitive | lineage4.1.2 | za | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR4033143 | Sensitive | lineage4.1.2 | za |
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