lineage | Count |
---|---|
lineage4.1 | 1 |
lineage4.1.2 | 101 |
lineage4 | 11 |
lineage4.9 | 18 |
19 | |
lineage5.1.4 | 1 |
lineage4.1.2.1 | 1 |
lineage4;lineage2.2 | 1 |
lineage2.2.1 | 1 |
La1.8.1 | 1 |
lineage1.2.2.2 | 1 |
lineage4.5 | 1 |
lineage4.3.2.1 | 1 |
lineage4.1.2;lineage1.2.2.1 | 4 |
spoligotype | Count |
---|---|
None | 162 |
ID | Drug resistance | Lineage | Country iso2 | SRR12708416 | Sensitive | lineage4.1 | None | SRR2101389 | Sensitive | lineage4.1.2 | None | SRR3675229 | Other | lineage4 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | ERR158583 | HR-TB | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675502 | Other | None | SRR3675279 | Other | None | SRR3675318 | Other | lineage4.9 | None | SRR3675387 | Sensitive | None | SRR4033564 | Sensitive | lineage4.1.2 | za | SRR3675514 | Sensitive | lineage4.9 | None | SRR4033574 | Sensitive | lineage4.1.2 | za | SRR4033579 | Sensitive | lineage4.1.2 | za | SRR4033576 | Sensitive | lineage4.1.2 | za | SRR3675522 | Other | None | SRR4033583 | Sensitive | lineage4.1.2 | za | SRR4033582 | Sensitive | lineage4.1.2 | None | SRR4033580 | Sensitive | lineage4.1.2 | None | SRR4033581 | Sensitive | lineage4.1.2 | za | SRR4033575 | Sensitive | lineage4.1.2 | za | SRR4033587 | Sensitive | lineage4.1.2 | za | SRR4033584 | Sensitive | lineage4.1.2 | za | SRR4033578 | Sensitive | lineage4.1.2 | za | SRR4033586 | Sensitive | lineage4.1.2 | za | SRR4033585 | Sensitive | lineage4.1.2 | za | SRR3675541 | Sensitive | lineage4.9 | None | SRR4033590 | Sensitive | lineage4.1.2 | za | SRR4033593 | Sensitive | lineage4.1.2 | za | SRR3675547 | Other | lineage4.9 | None | SRR4033589 | Sensitive | lineage4.1.2 | za | SRR4033592 | Sensitive | lineage4.1.2 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675550 | Other | None | SRR4033598 | Sensitive | lineage4.1.2 | za | SRR4033591 | Sensitive | lineage4.1.2 | za | SRR4033596 | Sensitive | lineage4.1.2 | za | SRR4033594 | Sensitive | lineage4.1.2 | za | SRR4033090 | Sensitive | lineage4.1.2 | None | SRR4033597 | Sensitive | lineage4.1.2 | za | SRR4033095 | Sensitive | lineage4.1.2 | za | SRR4033091 | Sensitive | lineage4.1.2 | za | SRR4033094 | Sensitive | lineage4.1.2 | za | SRR4033099 | Sensitive | lineage4.1.2 | za | SRR4033092 | Sensitive | lineage4.1.2 | za | SRR4033096 | Sensitive | lineage4.1.2 | za | SRR4033101 | Sensitive | lineage4.1.2 | None | SRR4033103 | Sensitive | lineage4.1.2 | None | SRR4033106 | Sensitive | lineage4.1.2 | za | SRR4033097 | Sensitive | lineage4.1.2 | za | SRR4033107 | Sensitive | lineage4.1.2 | za | SRR4033102 | Sensitive | lineage4.1.2 | za | SRR4033125 | Sensitive | lineage4.1.2 | za | SRR4033108 | Sensitive | lineage4.1.2 | za | SRR4033127 | Sensitive | lineage4.1.2 | za | SRR4033132 | Sensitive | lineage4.1.2 | za | SRR4033136 | Sensitive | lineage4.1.2 | za | SRR4033139 | Sensitive | lineage4.1.2 | za | SRR4033141 | Sensitive | lineage4.1.2 | za | SRR4033135 | Sensitive | lineage4.1.2 | za | SRR4033138 | Sensitive | lineage4.1.2 | za | SRR4033137 | Sensitive | lineage4.1.2 | za | SRR4033143 | Sensitive | lineage4.1.2 | za | SRR4033147 | Sensitive | lineage4.1.2 | None | SRR4033144 | Sensitive | lineage4.1.2 | None | SRR4033140 | Sensitive | lineage4.1.2 | za | SRR4033146 | Sensitive | lineage4.1.2 | None | SRR4033149 | Sensitive | lineage4.1.2 | None | SRR4033142 | Sensitive | lineage4.1.2 | za | SRR4033561 | Sensitive | lineage4.1.2 | za | SRR4033151 | Sensitive | lineage4.1.2 | za | SRR4033553 | Sensitive | lineage4.1.2 | za | SRR4033557 | Sensitive | lineage4.1.2 | za | SRR4033150 | Sensitive | lineage4.1.2 | za | SRR4033554 | Sensitive | lineage4.1.2 | za | SRR4033558 | Sensitive | lineage4.1.2 | za | SRR4033560 | Sensitive | lineage4.1.2 | za | SRR4033562 | Sensitive | lineage4.1.2 | za | SRR4033556 | Sensitive | lineage4.1.2 | za | SRR4033559 | Sensitive | lineage4.1.2 | za | SRR4033565 | Sensitive | lineage4.1.2 | za | SRR4033570 | Sensitive | lineage4.1.2 | za | SRR4033567 | Sensitive | lineage4.1.2 | za | SRR4033568 | Sensitive | lineage4.1.2 | za | SRR4033563 | Sensitive | lineage4.1.2 | None | SRR4033571 | Sensitive | lineage4.1.2 | za | SRR5341396 | Other | lineage4 | None | SRR4033572 | Sensitive | lineage4.1.2 | za | SRR4033573 | Sensitive | lineage4.1.2 | za | ERR2515274 | Sensitive | lineage4.1.2 | None | SRR4033569 | Sensitive | lineage4.1.2 | za | ERR2513283 | Other | lineage5.1.4 | None | ERR2515285 | Sensitive | lineage4.1.2 | za | ERR2515896 | Sensitive | lineage4.1.2 | za | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341418 | Other | None | SRR5341296 | Sensitive | lineage4.9 | None | SAMN02350451 | Sensitive | lineage4.1.2 | za | SRR6044819 | Sensitive | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6046482 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | ERR4831792 | MDR-TB | lineage4;lineage2.2 | None | SRR6046824 | HR-TB | None | SRR9971293 | Sensitive | lineage4.1.2 | None | SRR6896246 | Sensitive | lineage4.1.2 | None | SRR6832249 | Other | lineage2.2.1 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR9971232 | RR-TB | lineage4.1.2 | None | SRR6855723 | Sensitive | lineage4.1.2 | None | SRR6855784 | Sensitive | lineage4.1.2 | None | SRR6855954 | Sensitive | lineage4.1.2 | None | ERR502889 | Other | None | ERR400320 | Sensitive | lineage4 | None | ERR133986 | HR-TB | None | ERR3439432 | Other | None | ERR3468590 | Other | La1.8.1 | None | ERR067681 | HR-TB | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR400326 | Sensitive | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR4798406 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4809355 | MDR-TB | lineage4.1.2 | za | SRR1019125 | Sensitive | lineage4.1.2 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR7737923 | RR-TB | lineage4.1.2 | None | ERR7911217 | RR-TB | lineage4.1.2 | za | ERR8975532 | HR-TB | lineage4.3.2.1 | None | ERR8975540 | Sensitive | lineage4.1.2 | None | SRR10315694 | RR-TB | lineage4.1.2 | None | SRR10686529 | MDR-TB | lineage4.1.2 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR11342659 | RR-TB | lineage4.1.2 | None | SRR11349206 | RR-TB | lineage4.1.2 | None | SRR11349193 | RR-TB | lineage4.1.2 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1140925 | Sensitive | lineage4.1.2 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR1175508 | Other | lineage4.9 | None | SRR1180271 | Sensitive | lineage4.1.2;lineage1.2.2.1 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR1181127 | Sensitive | lineage4.1.2;lineage1.2.2.1 | None | SRR1181314 | Sensitive | lineage4.1.2;lineage1.2.2.1 | None | SRR1183065 | Sensitive | lineage4.1.2;lineage1.2.2.1 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR1182994 | Sensitive | lineage4.1.2 | None |
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