Rv0668 - c.3780C>T
Drug resistance types
80 Sensitive
0 RR-TB
14 HR-TB
7 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 7 |
| lineage4.9 | 61 |
| lineage2.2.1 | 4 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage1.2.2.2 | 12 |
| lineage4.3.4.2.1 | 1 |
| lineage4 | 6 |
| lineage4.3.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.4.1.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| 2 | |
| lineage4.6.3;lineage4.9 | 1 |
| lineage1.1.1 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.2.1 | 1 |
| lineage4.1.1.1 | 1 |
| lineage2.2.1.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.1.2 | 1 |
| La2;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage1.1.2 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage1.1.1;lineage4 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.1.1.3 | 1 |
| lineage3 | 2 |
| lineage5.1.4 | 1 |
| lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 127 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR369162 | Other | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR7069557 | Sensitive | lineage1.2.2.2 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR3275450 | Other | lineage4 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR12708384 | Sensitive | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR10809053 | Sensitive | lineage4.1.2.1 | None | ERR400345 | Other | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR7069206 | Sensitive | lineage1.2.2.2 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR2514859 | Sensitive | lineage1.2.2.2 | gb | ERR4812155 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR6480630 | Sensitive | lineage4.1.2.1 | None | ERR373947 | Other | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | SRR11972435 | Sensitive | lineage1.1.1 | None | ERR2514692 | Other | None | ERR349264 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR2514815 | Sensitive | lineage1.2.2.2 | gb | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR2514864 | Sensitive | lineage1.2.2.2 | gb | ERR349265 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | SRR6046245 | Other | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR363499 | Sensitive | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR15014654 | MDR-TB | lineage1.1.2 | None | SRR7069414 | Sensitive | lineage1.2.2.2 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR2512598 | Sensitive | lineage1.2.2.2 | gb | ERR2514210 | Sensitive | lineage1.2.2.2 | gb | ERR2517475 | Other | lineage4 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR7069961 | Sensitive | lineage1.2.2.2 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR7070657 | Sensitive | lineage1.2.2.2 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR7069103 | Sensitive | lineage1.2.2.2 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR363506 | Sensitive | lineage4.9 | None | SRR11972174 | Sensitive | lineage1.1.1;lineage4 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | ERR363479 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR3675318 | Other | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR6045371 | Other | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2514090 | Sensitive | lineage1.2.2.2 | gb | SRR6045706 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR3675547 | Sensitive | lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR363500 | Sensitive | lineage4.9 | None |
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