EBG00000313325 - n.188A>C
Drug resistance types
70 Sensitive
2 RR-TB
23 HR-TB
5 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
45 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 82 |
| lineage2.2.1 | 11 |
| La3;lineage4.9 | 8 |
| lineage4.1.1.3 | 1 |
| lineage4 | 1 |
| La1.3 | 2 |
| lineage6 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage3.1.2.1 | 1 |
| 2 | |
| lineage2.2.1.1 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.1.2.1 | 2 |
| lineage4.5 | 2 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage2.2.1.2 | 1 |
| La1.8.1 | 3 |
| lineage5.2 | 2 |
| La1.7.1;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage3.1.3 | 1 |
| La1;lineage4.9 | 2 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.2.1 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.3.3 | 1 |
| La3;lineage4 | 1 |
| lineage6.1.3 | 2 |
| lineage4.1.2 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.4.1.1 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.3.2.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.8 | 1 |
| La1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 149 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR400345 | Other | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR751326 | Other | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR9787362 | Sensitive | lineage6 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR3797079 | Sensitive | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | SRR6045010 | Sensitive | lineage4.9 | None | SRR1158918 | Sensitive | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4769453 | Other | La1.3 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR3797067 | Other | La1.8.1 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | SRR1159378 | Other | lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR161037 | Other | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR5341308 | Sensitive | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | SRR7535082 | Sensitive | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR3283028 | Other | La3;lineage4 | None | ERR1063896 | Sensitive | None | ERR9787336 | RR-TB | lineage6.1.3 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR6358979 | Other | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR5341330 | Other | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR1173777 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR752229 | Other | lineage4.5 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR1173568 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR9786592 | Other | lineage4.3.4.2 | None | ERR978756 | Other | lineage4.8 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR4769427 | Other | La1.2 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None |
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